DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and TYRDC

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001329473.1 Gene:TYRDC / 828986 AraportID:AT4G28680 Length:566 Species:Arabidopsis thaliana


Alignment Length:507 Identity:128/507 - (25%)
Similarity:197/507 - (38%) Gaps:86/507 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NNNNNNNNNITST-KDDLSSFVASHPA-AEF---EGFIRACVDEIIK-LAVFQGTNRSSKVVEWH 126
            |.|.|.|.::... |.:.:..|...|. :|.   :|.|  .||.|.. ....|.:.:...|:...
plant    25 NGNYNGNGHVNGNGKANGAKVVKMKPMDSELLREQGHI--MVDFIADYYKNLQDSPQDFPVLSQV 87

  Fly   127 EPAELRQLFDFQLREQGESQDKLRELLRETIRFSVKTG-----HPYFINQLYSGVDPYALVGQWL 186
            :|..||.:......|:.||   |:||| :.:...:..|     .|.:.....|.......:|:.|
plant    88 QPGYLRDMLPDSAPERPES---LKELL-DDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEML 148

  Fly   187 TDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPN------GGQGDGIFCPGGSIANGYAISCA 245
            ...|:...:|:..:|..|.:|..||..:.:::..|:      .|.|.|:....|..|....:..|
plant   149 NAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGKGNGGGVIQGTGCEAVLVVVLAA 213

  Fly   246 RYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGK--MRLSDLEK 308
            |.|   ..||.|......|:::.|:..|.|..|..:..|...:::|.:.|:....  |....||:
plant   214 RDR---ILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEE 275

  Fly   309 QVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLLN 373
            .:...|..|:.|..:.||.|||...|.|.|..:..:.|||.:|:|||||:.|.|.:..:||..::
plant   276 AISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFID 340

  Fly   374 GIERADSVTWNPHKLLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKHIQCG 438
            |||.|||...|.||.|.|:|.||....:.:..|.....||..||..|....||..:..|..|...
plant   341 GIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLS 405

  Fly   439 RRADVF----------------------------KFWFMWKAKGTQGLEAHVEKVFRMAEFFTAK 475
            ||...|                            |.|.:.:..|::.|...:.....:|:.|...
plant   406 RRFRFFISPFDVVFAGPISLTNLYVHAFDLYRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDY 470

  Fly   476 VRERPGFELVL----------------ESPECTNISFWYVPPGLREMERNRE 511
            |.:.|.||:|.                :..:|.              |||||
plant   471 VAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCN--------------ERNRE 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 108/427 (25%)
TYRDCNP_001329473.1 PLN02590 2..566 CDD:178200 128/507 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D810772at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.