DRSC/TRiP Functional Genomics Resources

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Protein Alignment b and gadl1

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_012820293.1 Gene:gadl1 / 733871 XenbaseID:XB-GENE-5721903 Length:522 Species:Xenopus tropicalis


Alignment Length:480 Identity:234/480 - (48%)
Similarity:333/480 - (69%) Gaps:9/480 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EGFIRACVDEIIKLAVFQGTNRSSKVVEWHEPAELRQLFDFQLREQGESQDKLRELLRETIRFSV 161
            |...|..::|:    |::.::.:.||.||.||.:|::|.|..:::.||..:||.:|.:..|::||
 Frog    51 EDVYRILMNEL----VYKASDINQKVCEWQEPEQLKKLLDLNIKDNGEPHEKLLQLCKNVIKYSV 111

  Fly   162 KTGHPYFINQLYSGVDPYALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQG 226
            ||.||.|.||||:|:|.|:|..:::|:|||||||||||:|:|.|.||.:|.:|...:|:.   :|
 Frog   112 KTSHPRFFNQLYAGMDHYSLAARFITEALNPSVYTYEVSPVFILTEEAILKKMIEFLGWK---EG 173

  Fly   227 DGIFCPGGSIANGYAISCARYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVR 291
            ||||.||||::|.||::.|||::.|:.|:.||.:|..|::||||:.|||::|.|.|:|.|:::|.
 Frog   174 DGIFSPGGSVSNMYAVNLARYKYCPDIKQKGLSSAPRLVMFTSEECHYSMKKAAAFLGIGTENVY 238

  Fly   292 KIATNEVGKMRLSDLEKQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDA 356
            .:.|::.|||...:||.|::...:....|.:||||:|||||||||.|..|:.:|:|:.:|.||||
 Frog   239 FVKTDDRGKMIPEELENQIQRAKKEAAVPFLVSATSGTTVLGAFDPLDDIANICEKHKLWFHVDA 303

  Fly   357 AWGGGALMSKKYRHLLNGIERADSVTWNPHKLLAASQQCSTFLTR-HQQVLAQCHSTNATYLFQK 420
            :|||.||||:|||..|:||.|||||.|||||:|.|..||...|.| :..:|.:|||..||||||:
 Frog   304 SWGGSALMSQKYRKCLHGIHRADSVAWNPHKMLMAGIQCCALLVRDNSGLLKRCHSAEATYLFQQ 368

  Fly   421 DKFYDTSFDTGDKHIQCGRRADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELV 485
            |||||..:|||||.|||.||||.||||.||||.||.|||..:.:...:..:..:::::|.||||:
 Frog   369 DKFYDVQYDTGDKSIQCSRRADAFKFWMMWKALGTTGLEERINRALALTRYLASEIKKRDGFELL 433

  Fly   486 LESPECTNISFWYVPPGLREMERNREFYDRLHKVAPKVKEGMIKKGSMMITYQPLRQLPNFFRLV 550
            .| ||..|..|||:||..|.||:..|::.:...|||.:||.|:||||||:.|||.|...||||.:
 Frog   434 WE-PEYANTCFWYIPPSFRNMEKGPEYWRKFSNVAPTIKERMMKKGSMMVGYQPHRDKVNFFRHI 497

  Fly   551 LQNSCLEESDMVYFLDEIESLAQNL 575
            :.:..:...||.:.|||||.|.::|
 Frog   498 VISPQVSREDMDFVLDEIERLGRDL 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 189/371 (51%)
gadl1XP_012820293.1 DOPA_deC_like 118..518 CDD:99743 207/403 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 412 1.000 Domainoid score I672
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H45812
Inparanoid 1 1.050 508 1.000 Inparanoid score I1291
OMA 1 1.010 - - QHG62386
OrthoDB 1 1.010 - - D162307at33208
OrthoFinder 1 1.000 - - FOG0000667
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45677
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X464
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.170

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