DRSC/TRiP Functional Genomics Resources

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Protein Alignment b and SEPSECS

DIOPT Version :10

Sequence 1:NP_476788.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001397643.1 Gene:SEPSECS / 51091 HGNCID:30605 Length:586 Species:Homo sapiens


Alignment Length:141 Identity:23/141 - (16%)
Similarity:51/141 - (36%) Gaps:23/141 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 RHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMF---MGF---GSDHVRKIATNEVGKMRLSDL 306
            ||||.|...         :..:..|.:....:.:|   |||   |...::.:.:::...:.....
Human    64 RHSPASASR---------VAGTTGARHHTRLMFVFLVEMGFHHVGQADLKLLTSSDRPFLAFQSA 119

  Fly   307 EKQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHL 371
            ......|.||||....:........:...::..|...|.::...        ...||:::::...
Human   120 RITGGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGR--------VASALVARRHYRF 176

  Fly   372 LNGIERADSVT 382
            ::||.|:..::
Human   177 IHGIGRSGDIS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_476788.1 GadA 127..573 CDD:439846 23/141 (16%)
SEPSECSNP_001397643.1 selenium_SpcS 12..543 CDD:211833 23/141 (16%)

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