DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and ddc

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_998507.1 Gene:ddc / 406651 ZFINID:ZDB-GENE-040426-2656 Length:480 Species:Danio rerio


Alignment Length:415 Identity:112/415 - (26%)
Similarity:183/415 - (44%) Gaps:40/415 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AAEFE-------GFIRACVDEIIKLAVFQGTNRSSKVVEWHEPAELRQLFDFQLREQGESQDKLR 150
            ||||.       .::...::.|.|..|:...          ||..||.|...:..|:.||.:.:.
Zfish     3 AAEFRRRGREMVDYVADYIENIEKRQVYPDV----------EPGYLRSLIPEEAPEEPESYEDVV 57

  Fly   151 ELLRETIRFSVKTGH-PYFINQLYSGVDPYALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEM 214
            :.:...|...|...| |||.....:.....|::...|..|:....:::..:|..|.:|..:|..:
Zfish    58 KDIERVIMPGVTHWHSPYFYAYFPTAHSYPAMLADILCGAIGCIGFSWAASPACTELETVMLDWL 122

  Fly   215 RRIVGFPNG------GQGDGIFCPGGSIANGYAISCARYR-------HSPESKKNGLFNAKPLII 266
            .:::..|..      |:|.|:.....|.|....:..||.:       ..|:..:..:.:  .|:.
Zfish   123 GKMLKLPEDFLAGTKGKGGGVIQSTASEATLITLLAARSKIVRLIQADHPDRSETDIIS--KLVA 185

  Fly   267 FTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQVKLCLENGWQPLMVSATAGTTV 331
            ::|:.||.|||:..:   .|...::||.|:....:|...||:.:|.....|..|....||.|||.
Zfish   186 YSSDQAHSSVERAGL---IGGVRMKKIPTDSKFSVRGDALERILKEDKAAGLIPFFFCATLGTTA 247

  Fly   332 LGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLLNGIERADSVTWNPHKLLAASQQCS 396
            ..|||.:..:..:|....||||:|||:.|.|.:..::|.||||||.|||..:||||.|..:..||
Zfish   248 SCAFDCITELGPICNAEKMWMHIDAAYAGSAFICPEFRPLLNGIEFADSFNFNPHKWLLINFDCS 312

  Fly   397 TFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKH--IQCGRRADVFKFWFMWKAKGTQGLE 459
            ....:.:..:.........||  |....::...|..:|  |..|||....|.||:::..|.:.|:
Zfish   313 AMWVKKRADIIGAFKMEPLYL--KHDHQESGLVTDYRHWQIPLGRRFRSLKMWFVFRMYGLKALQ 375

  Fly   460 AHVEKVFRMAEFFTAKVRERPGFEL 484
            |::.|...:|:.|.|.||....||:
Zfish   376 AYIRKHVGLAKEFEAFVRADQRFEI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 104/373 (28%)
ddcNP_998507.1 AAT_I 1..478 CDD:302748 112/415 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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