DRSC/TRiP Functional Genomics Resources

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Protein Alignment b and Tdc1

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_610226.2 Gene:Tdc1 / 35573 FlyBaseID:FBgn0259977 Length:587 Species:Drosophila melanogaster


Alignment Length:408 Identity:112/408 - (27%)
Similarity:180/408 - (44%) Gaps:32/408 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 EFEGFIRACVDEIIKLAVFQGTNRSSK-VVEWHEPAELRQLFDFQLREQGES-QDKLRELLRETI 157
            ||..:.:..:|.|.:    .|||...: |....:|..|::|......:..|. :|.|.:..::.:
  Fly     5 EFRKYGKEVIDYICQ----YGTNIEERDVAPTLDPGYLKKLLPADAPQSPEPFKDVLEDFEQKIM 65

  Fly   158 RFSVKTGHPYFINQLYSGVDPYALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPN 222
            ...|...||.|.....||....:::|..|:.|:....:::...|....:|..|:....:.:|.|.
  Fly    66 PGVVHWNHPKFFAYFPSGNSFPSVLGDMLSSAIGSIGFSWASCPAAAELETIVMNWYAKALGLPK 130

  Fly   223 GGQGDGIFCPGGSIANGYAISC-------ARYRHSPESK-----KNGLFNAKPLIIFTSEDAHYS 275
            ....|.....||....|.|..|       ||.|...|.|     .:.:| ...||.:.|.:||.|
  Fly   131 AFVSDAPGSTGGGALQGSASECVLVSLITARARAISELKGQTSVHDSVF-LPSLIAYASREAHSS 194

  Fly   276 VE---KLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQVKLCLENGWQPLMVSATAGTTVLGAFDD 337
            ||   |:|:.      .:|.|..:|.|:||:..|.:.::..:..|..|..|.||.|||...||||
  Fly   195 VEKATKMALV------KLRIIDADEHGRMRVDLLRQAIQNDVNAGLTPFFVVATVGTTGGCAFDD 253

  Fly   338 LAGISEVCKKY-NMWMHVDAAWGGGALMSKKYRHLLNGIERADSVTWNPHKLLAASQQCSTFLTR 401
            :..|.:||::. ::|:|||.|:.|.:.:..:.|....|:|.|||...||:|||..:...|....|
  Fly   254 ITEIGKVCRQVSSIWLHVDGAYAGNSFILPEMRVFSAGLEYADSFNTNPNKLLLTNFDASALWVR 318

  Fly   402 HQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKHIQCGRRADVFKFWFMWKAKGTQGLEAHVEKVF 466
            ....|....:.|..||..:   :.|..|.....|...||....|.||:::..|.:||:.::....
  Fly   319 DVMNLKSALNVNPLYLRHE---HLTGVDYRHYGIPLSRRFRALKLWFVFRTYGIRGLQEYIRNHM 380

  Fly   467 RMAEFFTAKVRERPGFEL 484
            .:|:.|...||:...||:
  Fly   381 ALAKKFEMLVRKDERFEV 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 104/374 (28%)
Tdc1NP_610226.2 Pyridoxal_deC 35..412 CDD:278699 104/374 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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