DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and amd

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster


Alignment Length:531 Identity:132/531 - (24%)
Similarity:213/531 - (40%) Gaps:107/531 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 AAEFEGFIRACVDEIIKLAVFQGTNRSSKVVEWHEPAELRQLFDFQLREQGES-QDKLRELLRET 156
            |.||..|.:|.:|.|   |.:....|...|:...||..|..|...::.|:.|: :|.|.::.|  
  Fly     3 AKEFREFGKAAIDYI---ADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISR-- 62

  Fly   157 IRFSVKTG---------HPYFINQLYSGVDPY-ALVGQWLTDALNPSVYTYEVAPLFTLMEEQVL 211
               .:|.|         |.|     |.....| ::||:.|........:::..:|..|.:|..|:
  Fly    63 ---VIKPGLTHWQSPHMHAY-----YPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVM 119

  Fly   212 AEMRRIVGFPNGGQ--GDGIFCPGGSIANGYAI-------------SCARYRHS----PESKKNG 257
            ..:.:.:..|...|  .||   |||.:..|.|.             :.|.||.|    .||:..|
  Fly   120 DWLAKFLKLPAHFQHASDG---PGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRG 181

  Fly   258 LFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQVKLCLENGWQPLM 322
                 .|:.::|:.::..:||..:....   .:|.:...|...:|...|...::..:..|..|::
  Fly   182 -----RLVAYSSDQSNSCIEKAGVLAAM---PIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVI 238

  Fly   323 VSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLLNGIERADSVTWNPHK 387
            ..||.|||...|:||:..:|.||:::.:|:|||||:.|||...::...|..|::|.||:.:|.||
  Fly   239 CVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHK 303

  Fly   388 LLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKHIQCGRRADVFKFWFMWKA 452
            .:..:..||....|....:....:.:..||..|.:......|.....|..|||....|.|..::.
  Fly   304 FMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRT 368

  Fly   453 KGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLESPECTNISFWYVPPGLREMERNREFYDRLH 517
            .|.:||..||.|...:|:.|...|.:...|||                                 
  Fly   369 LGAEGLRNHVRKHIELAKQFEQLVLKDSRFEL--------------------------------- 400

  Fly   518 KVAPKVKEGMI---KKGSMMITYQPLRQLPN---------------FFRLVLQNSCLEESDMVYF 564
             |||:.. |::   .||...||.|.|::|.:               |.|.|:.....:.||:.:.
  Fly   401 -VAPRAL-GLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMDTKASDIDFA 463

  Fly   565 LDEIESLAQNL 575
            ..||||...:|
  Fly   464 WQEIESQLTDL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 100/400 (25%)
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 104/434 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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