DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and Csad

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001346055.1 Gene:Csad / 246277 MGIID:2180098 Length:493 Species:Mus musculus


Alignment Length:473 Identity:246/473 - (52%)
Similarity:339/473 - (71%) Gaps:9/473 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 VDEIIKLAVFQGTNRSSKVVEWHEPAELRQLFDFQLREQGESQDKLRELLRETIRFSVKTGHPYF 168
            |||    |:.:||:.|.||.||.||.||:||.|.:|:.||||::::.|..|..|.:|||||||.|
Mouse    29 VDE----AILKGTSASEKVCEWKEPEELKQLLDLELQSQGESREQILERCRTVIHYSVKTGHPRF 89

  Fly   169 INQLYSGVDPYALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPG 233
            .|||:||:||:||.|:.:|::||.|.||||:||:|.||||:||.::|.:||:   ..|||:||||
Mouse    90 FNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLKKLRALVGW---NSGDGVFCPG 151

  Fly   234 GSIANGYAISCARYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEV 298
            |||:|.||::.||::..|:.|:.||....||.:|||::.|||:.|.|.|:|.|:|.||.:..:|.
Mouse   152 GSISNMYAMNLARFQRYPDCKQRGLRALPPLALFTSKECHYSITKGAAFLGLGTDSVRVVKADER 216

  Fly   299 GKMRLSDLEKQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGAL 363
            |:|...|||:|:.|....|..|.:||||:|||||||||.|..|::||:::.:|.||||||||..|
Mouse   217 GRMIPEDLERQIILAEAEGSVPFLVSATSGTTVLGAFDPLDAIADVCQRHGLWFHVDAAWGGSVL 281

  Fly   364 MSKKYRHLLNGIERADSVTWNPHKLLAASQQCSTFLTRH-QQVLAQCHSTNATYLFQKDKFYDTS 427
            :|:.:||||:||:|||||.|||||||||..|||..|.|. ..:|.:||.:.|:||||:|||||.:
Mouse   282 LSRTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLRDTSNLLKRCHGSQASYLFQQDKFYDVA 346

  Fly   428 FDTGDKHIQCGRRADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLESPECT 492
            .|||||.:|||||.|..|.|.||||:|.||||..:::.|.:..:...::::|.|||||:| ||..
Mouse   347 LDTGDKVVQCGRRVDCLKLWLMWKAQGGQGLERRIDQAFALTRYLVEEIKKREGFELVME-PEFV 410

  Fly   493 NISFWYVPPGLREMERNREFYDRLHKVAPKVKEGMIKKGSMMITYQPLRQLPNFFRLVLQNSCLE 557
            |:.||:|||.||..:.:.::..||.:|||.:||.|:|||:|||.|||.....||||:|:.|..|.
Mouse   411 NVCFWFVPPSLRGKKESPDYSQRLSQVAPVLKERMVKKGTMMIGYQPHGTRANFFRMVVANPILA 475

  Fly   558 ESDMVYFLDEIESLAQNL 575
            ::|:.:.|.|:|.|.|:|
Mouse   476 QADIDFLLGELELLGQDL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 198/371 (53%)
CsadNP_001346055.1 DOPA_deC_like 89..481 CDD:99743 207/395 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850747
Domainoid 1 1.000 426 1.000 Domainoid score I611
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 515 1.000 Inparanoid score I1283
Isobase 1 0.950 - 0.918296 Normalized mean entropy S2959
OMA 1 1.010 - - QHG62386
OrthoDB 1 1.010 - - D162307at33208
OrthoFinder 1 1.000 - - FOG0000667
OrthoInspector 1 1.000 - - otm44124
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45677
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5043
SonicParanoid 1 1.000 - - X464
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.940

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