DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and Sepsecs

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_766078.1 Gene:Sepsecs / 211006 MGIID:1098791 Length:504 Species:Mus musculus


Alignment Length:332 Identity:69/332 - (20%)
Similarity:107/332 - (32%) Gaps:115/332 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 SFVASH----PAAEFEGF-IRACVDEIIKLAVFQGTNRSSKVVE--WHEPAELRQLFDFQLREQ- 142
            ||.|..    ||...:|. .|...:.:|:|.:.||     |..|  |.|  ...:||..:|... 
Mouse     5 SFAAGERRVSPAYVRQGCEARRAHEHLIRLLLEQG-----KCPEDGWDE--STLELFLHELAVMD 62

  Fly   143 ----------GESQDKLRELLRETIRFSVKTGHPYFINQL-----YSGVDPYALVGQWLTDALNP 192
                      ||.:.::...|       |...|..||:.:     .|.|.|.|.....|....|.
Mouse    63 SNNFLGNCGVGEREGRVASAL-------VARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120

  Fly   193 SVY-------TYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISCA--RYR 248
            .|.       .:.||..|.:                             .:|.|.:::..  ..|
Mouse   121 LVLNVIKLAGVHSVASCFVV-----------------------------PMATGMSLTLCFLTLR 156

  Fly   249 HS-PESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQVK- 311
            |. |::|         .||:...| ..|..|..:..||....:..:...:..:..|..:|.::: 
Mouse   157 HKRPKAK---------YIIWPRID-QKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQE 211

  Fly   312 ------LCLENGWQPLMVSATAGTTVLGAF-----DDLAGISEVCKKYNMWMHVDAAWGGGALMS 365
                  |||.        |.||      .|     |.|..::.:|..|::...|:.|:|   |.|
Mouse   212 LGPEHILCLH--------STTA------CFAPRVPDRLEELAVICANYDIPHVVNNAYG---LQS 259

  Fly   366 KKYRHLL 372
            .|..||:
Mouse   260 SKCMHLI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 54/283 (19%)
SepsecsNP_766078.1 Tetramerization. /evidence=ECO:0000269|PubMed:18093968 1..44 12/43 (28%)
selenium_SpcS 13..458 CDD:211833 66/324 (20%)
Phosphate loop (P-loop). /evidence=ECO:0000269|PubMed:18093968 96..106 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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