DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment b and Ddc

DIOPT Version :9

Sequence 1:NP_001246025.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001177377.1 Gene:Ddc / 13195 MGIID:94876 Length:480 Species:Mus musculus


Alignment Length:384 Identity:106/384 - (27%)
Similarity:184/384 - (47%) Gaps:29/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 EPAELRQLFDFQLREQGESQDKLRELLRETIRFSVKTGH-PYFINQLYSGVDPYALVGQWLTDAL 190
            ||..||.|......::.|:.:.:.:.:.:.|...|...| |||.....:.....|::...|..|:
Mouse    34 EPGYLRPLIPATAPQEPETYEDIIKDIEKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAI 98

  Fly   191 NPSVYTYEVAPLFTLMEEQVLAEMRRIVGFP------NGGQGDGIFCPGGSIANGYAISCARYR- 248
            ....:::..:|..|.:|..::..:.:::..|      ..|:|.|:.....|.|...|:..||.: 
Mouse    99 GCIGFSWAASPACTELETVMMDWLGKMLELPEAFLAGRAGEGGGVIQGSASEATLVALLAARTKV 163

  Fly   249 ------HSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLE 307
                  .|||..:..:.  :.|:.:||:.||.|||:..:   .|...::.:.::....||.|.|.
Mouse   164 IRQLQAASPEFTQAAIM--EKLVAYTSDQAHSSVERAGL---IGGIKLKAVPSDGNFSMRASALR 223

  Fly   308 KQVKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLL 372
            :.::.....|..|..|.||.|||...:||:|..:..:|.:..:|:|:|||:.|.|.:..::|:||
Mouse   224 EALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLL 288

  Fly   373 NGIERADSVTWNPHKLLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKH--I 435
            ||:|.|||..:||||.|..:..||....:.:..|....:.:..||  |....|:.|.|..:|  |
Mouse   289 NGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFNMDPVYL--KHSHQDSGFITDYRHWQI 351

  Fly   436 QCGRRADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLESPECTNI 494
            ..|||....|.||:::..|.:||:|::.|...::..|.:.||:.|.||:      ||.:
Mouse   352 PLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFESLVRQDPRFEI------CTEV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_001246025.1 AAT_I 128..499 CDD:302748 105/383 (27%)
DdcNP_001177377.1 Pyridoxal_deC 35..414 CDD:395219 105/383 (27%)
2 X approximate tandem repeats 58..178 24/119 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.