DRSC/TRiP Functional Genomics Resources

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Protein Alignment b and gad1

DIOPT Version :10

Sequence 1:NP_476788.1 Gene:b / 34791 FlyBaseID:FBgn0000153 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_004917766.1 Gene:gad1 / 100496528 XenbaseID:XB-GENE-1011699 Length:590 Species:Xenopus tropicalis


Alignment Length:527 Identity:241/527 - (45%)
Similarity:346/527 - (65%) Gaps:12/527 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QASKMLANAANNNNNNNNNITSTKDDLSSFVASH--PAAEFEGFIRACVDEIIKLA---VFQGTN 117
            ||||.|  ....|...::.....:.|.|:..|..  ||...|.|....:.|::.:.   |.:..:
 Frog    67 QASKNL--LVCENIEKDSQFRRAETDFSNLFARDLLPAKNGEEFTMQFLLEVVDILLNYVRKTFD 129

  Fly   118 RSSKVVEWHEPAELR---QLFDFQLREQGESQDKLRELLRETIRFSVKTGHPYFINQLYSGVDPY 179
            ||:||:::|.|.:|.   :.|:.:|.:..||.:::....|:|:::.|:||||.|.|||.:|:|..
 Frog   130 RSTKVLDFHHPHQLLEGIEGFNLELSDNPESLEQILVDCRDTLKYGVRTGHPRFFNQLSTGLDII 194

  Fly   180 ALVGQWLTDALNPSVYTYEVAPLFTLMEEQVLAEMRRIVGFPNGGQGDGIFCPGGSIANGYAISC 244
            .|.|:|||...|.:::|||:||:|.|||:..|.:||.|:|:.. ..|||||.|||:|:|.|:|..
 Frog   195 GLAGEWLTSTANTNMFTYEIAPVFVLMEQITLRKMREIIGWTE-KDGDGIFSPGGAISNMYSIMA 258

  Fly   245 ARYRHSPESKKNGLFNAKPLIIFTSEDAHYSVEKLAMFMGFGSDHVRKIATNEVGKMRLSDLEKQ 309
            |||::.||.|..|:.....|::||||.:|||::|....:||||::|..:.|||.||:..:|||.:
 Frog   259 ARYKYFPEVKTKGMAAVPRLVLFTSEHSHYSIKKTGAALGFGSENVIMVKTNERGKIIPADLEAK 323

  Fly   310 VKLCLENGWQPLMVSATAGTTVLGAFDDLAGISEVCKKYNMWMHVDAAWGGGALMSKKYRHLLNG 374
            :....:.|:.||.|:|||||||.||||.::.|:::|:|||:|:|||||||||.|||:::||.|:|
 Frog   324 ILEAKQKGYVPLYVNATAGTTVYGAFDPISEIADICEKYNLWLHVDAAWGGGLLMSRRHRHKLDG 388

  Fly   375 IERADSVTWNPHKLLAASQQCSTFLTRHQQVLAQCHSTNATYLFQKDKFYDTSFDTGDKHIQCGR 439
            ||||:||||||||::....|||..|.|.:.:|..|:...|.||||:||.||.|:|||||.|||||
 Frog   389 IERANSVTWNPHKMMGVLLQCSAILLREKGILQGCNQMCAGYLFQQDKQYDISYDTGDKAIQCGR 453

  Fly   440 RADVFKFWFMWKAKGTQGLEAHVEKVFRMAEFFTAKVRERPGFELVLES-PECTNISFWYVPPGL 503
            ..|:||||.|||||||.|.||.:.|...:||:..:|:..|.|||:|... ||.||:.|||:||.|
 Frog   454 HVDIFKFWLMWKAKGTVGFEAQINKCLELAEYLYSKIYNREGFEMVFNGVPEHTNVCFWYIPPSL 518

  Fly   504 REMERNREFYDRLHKVAPKVKEGMIKKGSMMITYQPLRQLPNFFRLVLQNSCLEESDMVYFLDEI 568
            |.|..|.|..::||:||||:|..|::.|:.|:.|||.....||||:|:.|....:||:.:.::||
 Frog   519 RGMPNNEEKQEKLHRVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATKSDIDFLVEEI 583

  Fly   569 ESLAQNL 575
            |.|.|.|
 Frog   584 ERLGQEL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bNP_476788.1 GadA 127..573 CDD:439846 219/449 (49%)
gad1XP_004917766.1 Pyridoxal_deC 140..514 CDD:395219 186/374 (50%)

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