DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sos and Rgl3

DIOPT Version :9

Sequence 1:NP_476597.2 Gene:Sos / 34790 FlyBaseID:FBgn0001965 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_076111.2 Gene:Rgl3 / 71746 MGIID:1918996 Length:709 Species:Mus musculus


Alignment Length:674 Identity:176/674 - (26%)
Similarity:258/674 - (38%) Gaps:159/674 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 IERLTYHIYA-----DPTFVRTFLTTYRYFCSPQQLLQLLVERFNIPDPSLVYQDTGTAGAGGMG 709
            :|||.:.:.:     ||.||..||.|:|.|....::|..|:.....|.|.       .||.....
Mouse    73 LERLVHELVSGDREQDPGFVPAFLATHRAFVPTARVLGFLLPPPPPPPPP-------PAGVDSKR 130

  Fly   710 GVGGDKEHKNSHREDWKRYRKEYVQPVQFRVLNVLRHWVDHHFYDFEKDPMLLEKLLN---FL-- 769
            ..|.|.....:.|                .|::||..|:.:|..|| :||...:.|.|   ||  
Mouse   131 TEGQDLNFSKNLR----------------AVVSVLGSWLRNHPQDF-RDPPDHQNLGNVRIFLGW 178

  Fly   770 ---EHVNGKSMRKWVDSVLKIVQRKNEQEKSNKKIVYAYGHDPPPIEHHLSVPNDEIT------- 824
               .....:...|.::..||  :.|.||.:..|::.::   .||.|   ...|..|..       
Mouse   179 AAPGGAEAREAEKLLEDFLK--EAKGEQTEEEKRLAWS---GPPRI---AQTPGSEFAEDCVEEE 235

  Fly   825 --------LLTLHPLELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVK---SPNLLKIMKHTT 878
                    ||.....::|.||||::.|::..|:..|.:||.|:::|:...   ||.:...:....
Mouse   236 GPSSEGPELLDFSVDDVAEQLTLMDVELFLRVRSCECLGSMWSQRDRPGAAGISPTVRATVAQFN 300

  Fly   879 NVTRWIEKSITEAENYEERLAIMQRA------IEVMMVMLELNNFNGILSIVAAMGTASVYRLRW 937
            .||..:..|:..|..    ||..|||      |.:.....||.||:.:.:|::|:.:..:|||:.
Mouse   301 TVTGCVLGSVLAAPG----LAASQRAQRIEKWIRIAQRCRELRNFSSLRAILSALQSNPIYRLKR 361

  Fly   938 TFQGLPERYRKFLEECRELS------DDHLKK----YQER-----------LRSINPP-CVPFFG 980
            ::..:.   |:.|...|:||      |:||..    .||.           |.|..|| .||:.|
Mouse   362 SWGAVS---REPLSVFRKLSQIFSDEDNHLSSRAILSQEETTEDDDCPSGSLPSKLPPGPVPYLG 423

  Fly   981 RYLTNILHLEEGNPDLLANTELINFSKRRKVAEIIGEIQQYQN--QPYCLNEESTIRQFFEQLDP 1043
            .:||:::.|:...||.|.. .||||.||||..||:..|||.|.  |.|.|:....|   ...|..
Mouse   424 TFLTDLVMLDTALPDTLKG-NLINFEKRRKEWEILARIQQLQQRCQRYSLSPRPPI---LAALRA 484

  Fly  1044 FNGLSDKQMSDYLYNESLRIEP--RGCKTVPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNST 1106
            ...||::|.    |..|..|||  ..|.:              ||.|:.|.......|:|||...
Mouse   485 QRQLSEEQS----YRVSRVIEPPAASCPS--------------SPRIRRRISLTKRLSAKLSREK 531

  Fly  1107 SSVAAAAAA--SSTATSIATASAPSLHASSIMDAPTAAAANAGSGTLAGEQSPQHNPHAFSVFAP 1169
            :|....:..  ||..:|::..|.||...:.....|.:..|:      .|.|||. ...:.::..|
Mouse   532 NSSPGGSPGDPSSPTSSVSPGSPPSSPRNREPPPPGSPPAS------PGPQSPS-TKLSLTMDPP 589

  Fly  1170 VIIPERNTSSWSGTPQHTRTDQNNGEVSVPAPHLPKKPGAHVWANNNS-------TLASASAMDV 1227
            ...|...|.|.|..|   ...|...|..|          ..|..|||.       .|........
Mouse   590 GPWPVTLTPSSSRVP---LLGQQTSEARV----------IRVSINNNHGNLYRSILLTCQDKAPS 641

  Fly  1228 VFSPALPEHLPPQSLPDSNPFASD 1251
            |...||.:|..||      |:|.|
Mouse   642 VVQRALEKHNVPQ------PWARD 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SosNP_476597.2 Histone 90..216 CDD:278551
H2A 155..>196 CDD:305064
RhoGEF 249..432 CDD:238091
PH_SOS 476..586 CDD:269963
PH 482..587 CDD:278594
RasGEFN 637..791 CDD:214571 37/153 (24%)
RasGEF 825..1062 CDD:238087 82/269 (30%)
Rgl3NP_076111.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..55
REM 73..199 CDD:100121 37/151 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..225 7/27 (26%)
RasGEF 244..503 CDD:214539 84/273 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 395..416 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..604 28/122 (23%)
Interaction with HRAS, MRAS and RIT1. /evidence=ECO:0000269|PubMed:10869344, ECO:0000269|PubMed:11313946 611..706 16/65 (25%)
RalGDS_RA 612..697 CDD:176351 16/64 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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