DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sos and RalGPS

DIOPT Version :10

Sequence 1:NP_476597.2 Gene:Sos / 34790 FlyBaseID:FBgn0001965 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_725613.1 Gene:RalGPS / 36881 FlyBaseID:FBgn0034158 Length:702 Species:Drosophila melanogaster


Alignment Length:480 Identity:120/480 - (25%)
Similarity:207/480 - (43%) Gaps:93/480 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   776 SMRKWVDSVLKIVQRKNEQEKSNKKIVYAYGHDP--------------PP-----IEHHLSVPN- 820
            ||:......|.|   |:.:.|::...:.::...|              ||     :..|.|:.. 
  Fly    94 SMQPQASKTLNI---KSTRRKNSIGCLNSFSSSPDSPGCYYTIAASAAPPSKSQSLPAHASIKQL 155

  Fly   821 DEITLLTLH-PLE-LARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSPNLLKIMKHTTNVTRW 883
            |.:.|..|. |.: ||.|:|||:|.::..::|.||....||||||.|.:||::...|...:.:.|
  Fly   156 DAVILSALRVPADVLANQITLLDFPVFAQIQPDELSSCAWTKKDKHVNTPNIVAFTKRFNHTSFW 220

  Fly   884 IEKSITEAENYEERLAIMQRAIEVMMVMLELNNFNGILSIVAAMGTASVYRLRWTFQGLPERYRK 948
            ..:.|..||..::|..|:...|:|...:.||||.:.:.:|::||.:||:|||..|:..|.::.|.
  Fly   221 TVQEILNAEQPKQRAEIITHFIKVAKKLHELNNLHSLFAIISAMQSASIYRLTKTWACLSKKDRN 285

  Fly   949 FLEECRELSDD-----HLKKYQERLRSINPPCVPFFGRYLTNILHLEEGNPDLLANTELINFSKR 1008
            ..:...::..|     :|:.|.|.||.   ||:|:.|.:||::::::..:|.   ...|....:|
  Fly   286 AFDRLSDIFSDQDNWANLRSYLESLRL---PCIPYLGLFLTDLIYIDLAHPH---KGGLEPEQRR 344

  Fly  1009 RKVAEIIGEIQQYQ--NQPYCLNEESTIR-----QFFEQLDPFNGLSDKQMSDYLYNESLRIEP- 1065
            .|:..|:..|..||  |..:....|:|.:     ::.|:|.  |...:.|     |..||.:|| 
  Fly   345 NKMNNILRVISNYQQSNYKHLQKHEATQKYLTSIRYIEELQ--NIFEEDQ-----YKRSLNLEPA 402

  Fly  1066 -------RGCKTVPKFPRKWPHIPLKSP-----GIKPRRQNQTNSSSKLSNSTSSVAAAAAASST 1118
                   ..|.:...|     ::.:.:|     .:.|.:   |..|.::::.|..|.......|.
  Fly   403 SPSGPSSSSCSSKESF-----NVEVVTPALGCLNLSPAK---TIGSMRMASGTKFVPGHRKCRSL 459

  Fly  1119 ATSIATASAPSLHASS-----IMDAPTAAAANAGSGTLAGEQSPQHNPHAFSVFAPVIIPERNTS 1178
            .|...::|.|...|..     :|.||       |.||::.::.     ....:|..  |...|.|
  Fly   460 GTKFRSSSLPRNFAEKCQCCIVMIAP-------GIGTISNKRC-----RCRRIFGK--IATHNHS 510

  Fly  1179 SWSGTPQHTRTDQNNGEVSVPAPHL 1203
              .|.|.|...:.:..:|. |..||
  Fly   511 --DGHPHHLHLELDPSQVQ-PRHHL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SosNP_476597.2 HFD_SOS1_rpt1 68..145 CDD:467039
HFD_SOS1_rpt2 153..227 CDD:467040
RhoGEF 249..432 CDD:238091
PH_SOS 476..586 CDD:269963
RasGEFN 637..791 CDD:214571 4/14 (29%)
RasGEF 825..1062 CDD:238087 75/250 (30%)
PHA03247 <1197..1502 CDD:223021 3/7 (43%)
RalGPSNP_725613.1 RasGEF 169..335 CDD:459872 56/171 (33%)
PH_RalGPS1_2 578..692 CDD:270120
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.