Sequence 1: | NP_476597.2 | Gene: | Sos / 34790 | FlyBaseID: | FBgn0001965 | Length: | 1596 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023389.1 | Gene: | pxf-1 / 177894 | WormBaseID: | WBGene00004254 | Length: | 1470 | Species: | Caenorhabditis elegans |
Alignment Length: | 1542 | Identity: | 286/1542 - (18%) |
---|---|---|---|
Similarity: | 511/1542 - (33%) | Gaps: | 527/1542 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 SYGG----GI-------GLGTGGGGGSGGSGSGSQGGGGGIGIG--------GGGVAGLQDCDGY 58
Fly 59 DFTKCENAARWRGLFTPSLKKVLEQVHPRVTAKEDALLYVE---------KLCLRLLAMLCAKPL 114
Fly 115 PHSVQDVEEKV---NKSFPAPIDQWA--LNEAKEVINSKKRKSVLPTEKVHTLLQKDVLQYKIDS 174
Fly 175 SVSAFLVAVLEYISADILKMAGDYVIKIAHCEITKEDIEVVMNADRVLMDMLNQSEAHILPSPLS 239
Fly 240 LPAQRASATYEETV-------------KELIH---DEKQYQRDLHMI------IRVFREELVKIV 282
Fly 283 SDPRELEPIFSNIM-----DIYEVTVTLLGSLEDVIEMSQEQSAPCVGSCFEELAEAEE-FDVYK 341
Fly 342 KYAYDVTSQASRDALNNLLS----------KPGASSLTTAGHGFRDAVKYYLPKLLL-------- 388
Fly 389 ---VPICHAFVYFDYIKHLKDLSSSQDDIESFEQVQGLLHPLHCDLEKVMASLSKERQVPVSGRV 450
Fly 451 RRQLAIERT----RELQMKVEHWEDKDVGQNCNEFIREDSLSKLGSG---------------KRI 496
Fly 497 WSERKVFLFDGLMVLCKANTKKQTPSAGATAYDYRLKEKYFMRRVDINDRPD-SDDLK-NSFELA 559
Fly 560 P-RMQPPIVLTAKNAQHKHDWMADLLMVITKSMLDRHLDSILQDIERKHPLRMPSPE----IYKF 619
Fly 620 AVPDSGDNIVLEERESAGVPMIKGATLCKLIERLTYHIYADPTFVRTFLTTYRYFCSPQQLLQLL 684
Fly 685 VERFNI-----PDPSLVYQDTGTAGAGGMGGVGGDKEHKNSHREDWKRYRKEYVQPVQFRVLNVL 744
Fly 745 RHWVDHHFY---DFEKDPMLLEKLLNFLEHVNGKSMRKWVDSVLKIVQRKNEQEKSNKKIVYAYG 806
Fly 807 HDPPPIEHHLSVPNDEITLLTLHPLELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSPNLL 871
Fly 872 KIMKHTTNVTRWIEKSITEAENYEERLAIMQRAIEVMMVMLELNNFNGILSIVAAMGTASVYRLR 936
Fly 937 WTFQGLPERYRKFLEECRELSDD--HLKKYQERLRSI--NPPCVPFFGRYLTNILHLEEGNPDLL 997
Fly 998 ANTELINFSKRRKVAEIIGEIQQYQNQPY---CLNEES--TIRQFFEQLDPF---------NGLS 1048
Fly 1049 DKQMS--DYLYNESLRIEP-----RGCKTVPKFPRKWPHIPLKSPG--IKPRRQNQTNSSSKLSN 1104
Fly 1105 STSSVAAAAAASSTATSIATASAPSLHASS---IMDAPTAAAANAGSGTLAGEQSPQHNPHAFSV 1166
Fly 1167 FAPVIIPERNTSSWSGTPQHTRTDQNNGEVSVPAPHLPKKPGAHVWANNNSTLASASAMDVVFSP 1231
Fly 1232 ALPEHLPPQSLPDSNPFASDT-------------EAPPSPL----PKLVVSPRHETGNRSPF--H 1277
Fly 1278 GRMQNSP-------------THSTASTVTLTGMSTSGGEEFCAGGFYFNSAHQGQPGAVPISPHV 1329
Fly 1330 NVPMATN----MEYRAVPPPLPPRRK------ERTESCADMAQKRQA 1366 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sos | NP_476597.2 | Histone | 90..216 | CDD:278551 | 23/139 (17%) |
H2A | 155..>196 | CDD:305064 | 4/40 (10%) | ||
RhoGEF | 249..432 | CDD:238091 | 40/231 (17%) | ||
PH_SOS | 476..586 | CDD:269963 | 20/127 (16%) | ||
PH | 482..587 | CDD:278594 | 20/122 (16%) | ||
RasGEFN | 637..791 | CDD:214571 | 29/161 (18%) | ||
RasGEF | 825..1062 | CDD:238087 | 61/256 (24%) | ||
pxf-1 | NP_001023389.1 | CAP_ED | 45..131 | CDD:237999 | |
cNMP | 348..458 | CDD:197516 | 25/143 (17%) | ||
RasGEFN | 479..592 | CDD:214571 | 27/139 (19%) | ||
PDZ_signaling | 595..662 | CDD:238492 | 11/91 (12%) | ||
PDZ_GEF_RA | 782..867 | CDD:176380 | 28/151 (19%) | ||
RasGEF | 890..1118 | CDD:238087 | 56/230 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2063 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |