DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sos and Ralgps1

DIOPT Version :9

Sequence 1:NP_476597.2 Gene:Sos / 34790 FlyBaseID:FBgn0001965 Length:1596 Species:Drosophila melanogaster
Sequence 2:XP_006234077.1 Gene:Ralgps1 / 100361774 RGDID:2319500 Length:609 Species:Rattus norvegicus


Alignment Length:655 Identity:136/655 - (20%)
Similarity:235/655 - (35%) Gaps:225/655 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   815 HLSVPNDEIT--LLTLHPLELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSPNLLKIMKHT 877
            |.|...|.:.  :|.:.|.|.|.|:||::..::|.::|.||....|:||:|...:||::...:..
  Rat    34 HASKSYDAVVFDVLKVTPEEFASQITLMDIPVFKAIQPEELASCGWSKKEKHSLAPNVVAFTRRF 98

  Fly   878 TNVTRWIEKSITEAENYEERLAIMQRAIEVMMVMLELNNFNGILSIVAAMGTASVYRLRWTFQGL 942
            ..|:.|:.:.|..|:..:.|..|:...:::...:|||||.:.::|:|:|:.:|.::||..|:..|
  Rat    99 NQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALL 163

  Fly   943 PERYRKFLEECREL--SDDHLKKYQERLRSIN-PPCVPFFGRYLTNILHLEEGNP---DLLANTE 1001
            ..:.:...|:...|  .:|:.|:.::.:||:. .|.:|:.|.||.::::::...|   .::.|.:
  Rat   164 NRKDKTTFEKLDYLMSKEDNYKRTRDYIRSLKMVPSIPYLGIYLLDLIYIDSAYPASGSIMENEQ 228

  Fly  1002 LINFSKRRKVAEIIGEIQ---QYQN---QPYCLNEESTIRQFFEQLDPFNGLSDKQMSDYLYNES 1060
            ..|  :...:..||.::|   .|.:   .|:......::| :.|:|..|       :.|..|..|
  Rat   229 RSN--QMNNILRIIADLQVSCSYDHLTTLPHVQKYLKSVR-YIEELQKF-------VEDDNYKLS 283

  Fly  1061 LRIEPRGCKTVPKFPRKWPHIPLKSPGIKPRRQNQTNSSSKLSNSTSSVAAAAAASSTATSIATA 1125
            |||||                              .:||.:|.:|...:|..:|.||:|......
  Rat   284 LRIEP------------------------------GSSSPRLVSSKEDLAGPSAGSSSARFRRRP 318

  Fly  1126 SAPSLHASSIMDAPTAAAANAGSGTLAGEQSPQHNPHAFSVFAPVIIPERNTSSWSGTPQHTRTD 1190
            :.|        ||..|.                                                
  Rat   319 TCP--------DASVAG------------------------------------------------ 327

  Fly  1191 QNNGEVSVPAPHLPKKPGAHVWANNNSTLASASAMD---VVFSPALPEHLPPQSLPDSNPFASDT 1252
                  |:|.|.:|:...:|...||  .:...|.:|   ..|......||...|:.:|       
  Rat   328 ------SLPTPPVPRHRKSHSLGNN--LMCQLSVVDSKSATFPSEKARHLLDDSVLES------- 377

  Fly  1253 EAPPSPLPKLVVSPRHETGNRSPFHGRMQNSPTHSTASTVTLTGMSTSGGEEFCAGGFYFNSAHQ 1317
                                |||..|.     || |:||....|:|....|              
  Rat   378 --------------------RSPRRGL-----TH-TSSTAITNGLSLGSSE-------------- 402

  Fly  1318 GQPGAVPISPHVNVPMATNME-----YRAVPP--PLPPRRKERTESCADMAQKRQAPDAP----- 1370
                    |...:..|:..:|     |..:.|  .:|.|...||.||.      .:|.:|     
  Rat   403 --------SSEFSEEMSAGLESRGRLYATLGPNWRVPVRNSPRTRSCV------YSPTSPCTCTV 453

  Fly  1371 ----TLPPRDGEL---------SPPPIPP------RLNHSTGISY------------LRQSHGKS 1404
                |:|..:|.|         ..|.:|.      .|:.||.:.|            .:.:.||.
  Rat   454 GSSATVPTMEGPLRRKTLLKEGRKPALPSWTRYWVVLSGSTLLYYGAKSLRGTDRKHYKSTPGKK 518

  Fly  1405 KEFVG 1409
            ...||
  Rat   519 VSIVG 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SosNP_476597.2 Histone 90..216 CDD:278551
H2A 155..>196 CDD:305064
RhoGEF 249..432 CDD:238091
PH_SOS 476..586 CDD:269963
PH 482..587 CDD:278594
RasGEFN 637..791 CDD:214571
RasGEF 825..1062 CDD:238087 62/248 (25%)
Ralgps1XP_006234077.1 RasGEF 46..288 CDD:214539 65/251 (26%)
PH_RalGPS1_2 461..576 CDD:270120 12/63 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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