DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adat1 and Adar

DIOPT Version :10

Sequence 1:NP_609676.1 Gene:Adat1 / 34787 FlyBaseID:FBgn0028658 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_006232836.1 Gene:Adar / 81635 RGDID:71099 Length:1183 Species:Rattus norvegicus


Alignment Length:438 Identity:116/438 - (26%)
Similarity:181/438 - (41%) Gaps:107/438 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EIAELCLKKFESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCGTKCIGESKLCPNGLILN 75
            :||.|..:.|.:|..:.:|:.....|||.|:......:...:||||.|.:|:....|...|..:|
  Rat   797 QIAMLSHRCFNALTNSFQPSLLGRKILAAIIMKRDPEDMGVVVSLGTGNRCVKGDSLSLKGETVN 861

  Fly    76 DSHAEVLARRGFLRFLYQELKQDRIFHWNSTLSTYDM---------DEHVEFHFLSTQTPCGDAC 131
            |.|||:::||||:||||.||.  :..|..:..|.:::         .:.|.||...:..||||..
  Rat   862 DCHAEIISRRGFIRFLYSELM--KYNHHTAKNSIFELARGGEKLQIKKTVSFHLYISTAPCGDGA 924

  Fly   132 ILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQTP--GALRTKPGRGERTL------- 187
            :.:      ::...|..|.:|..:.           |:.:.|  |.||||...||.|:       
  Rat   925 LFD------KSCSDRAVESTESRHY-----------PVFENPKQGKLRTKVENGEGTIPVESSDI 972

  Fly   188 --------------SMSCSDKIARWNVIGVQGALLDVLISKPIYFSS--LNFCCDDAQLESLERA 236
                          :|||||||.||||:|:|||||...: :|:|..|  |.:......   |.||
  Rat   973 VPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFL-QPVYLKSVTLGYLFSQGH---LTRA 1033

  Fly   237 IFKRFDCRTFKHTRFQPQRPQINIDPGIRFEF--------------SQRSDWQPSPNGLIWSQVP 287
            |.    ||.        .|.....:.|:|:.|              |:|...:.....:.|....
  Rat  1034 IC----CRV--------TRDGNAFEDGLRYPFIVNHPKVGRVSVYDSKRQSGKTKETSVNWCLAD 1086

  Fly   288 EELRPYEISV-NGKRQGVTKKKMKTSQAALAISKYKLFLTFLELVKFNPKLSEMFDQQLSDPERI 351
                .|::.: :|.|..|.....:.|:    :||..:||.|.:|..|..:         .|..::
  Rat  1087 ----GYDLEILDGTRGTVDGPGKELSR----VSKKNIFLQFKKLCSFRAR---------RDLLQL 1134

  Fly   352 AYASCKDLARDYQFA----WREIKEKYFLQWTKKPHELLDFN--PMSN 393
            :|...|..||||..|    .:.:::..:..|..||.|..:|.  |:.|
  Rat  1135 SYGEAKKAARDYDLAKNYFKKSLRDMGYGNWISKPQEEKNFYLCPVPN 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adat1NP_609676.1 ADEAMc 7..389 CDD:214718 113/430 (26%)
AdarXP_006232836.1 z-alpha 145..211 CDD:280459
z-alpha 253..317 CDD:295419
DSRM_DRADA_rpt1 460..530 CDD:380742
DSRM_SF 571..641 CDD:444671
DSRM_DRADA_rpt3 679..749 CDD:380744
ADEAMc 793..1176 CDD:214718 113/430 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.