DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Adat1 and Adarb1

DIOPT Version :9

Sequence 1:NP_001260450.1 Gene:Adat1 / 34787 FlyBaseID:FBgn0028658 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_006256337.1 Gene:Adarb1 / 25367 RGDID:2033 Length:775 Species:Rattus norvegicus


Alignment Length:446 Identity:120/446 - (26%)
Similarity:190/446 - (42%) Gaps:103/446 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NKKPTVKE-------------IAELCLKKFESLPKT-GKPTANQWTILAGIV-EFNRNTEACQLV 53
            :::|.:.|             ::.|.|.||..|... ..|.|.: .:|:|:| ....:.:..:::
  Rat   370 SRQPVLSEGLQLHLPQVLADAVSRLVLGKFSDLTDNFSSPHARR-KVLSGVVMTTGTDVKDAKVI 433

  Fly    54 SLGCGTKCIGESKLCPNGLILNDSHAEVLARRGFLRFLYQEL------KQDR---IFHWNSTLST 109
            |:..|||||....:...||.|||.|||:::||..|||||.:|      |:|:   ||. .|....
  Rat   434 SVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYAQLELYLNNKEDQKKSIFQ-KSERGG 497

  Fly   110 YDMDEHVEFHFLSTQTPCGDACILEEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQTPG 174
            :.:.:.|:||...:.:|||||.|....:|..    :.:..||.      :|.......|..:..|
  Rat   498 FRLKDTVQFHLYISTSPCGDARIFSPHEPVL----EGMAPDSH------QLTEPADRHPNRKARG 552

  Fly   175 ALRTK--------PGR-------------GERTLSMSCSDKIARWNVIGVQGALLDVLISKPIYF 218
            .||||        |.|             |||.|:||||||||||||:|:|||||.:.: :||||
  Rat   553 QLRTKIESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGALLSIFV-EPIYF 616

  Fly   219 SSLNFCCDDAQL---ESLERAIFKRFDCRTFKHTRFQPQRPQINIDPGIRFEFSQRSDWQP--SP 278
            ||:..    ..|   :.|.||:::|.       :..:...|...::..:....|.....||  :|
  Rat   617 SSIIL----GSLYHGDHLSRAMYQRI-------SNIEDLPPLYTLNKPLLSGISNAEARQPGKAP 670

  Fly   279 N-GLIWSQVPEELRPYEISVNGKRQGVTKKKMKTSQAALAISKYKLFLTFLEL-VKFNPKLSEMF 341
            | .:.|:.....:.....:......|...:          :.|:.|:..::.: .|..|.|   .
  Rat   671 NFSVNWTVGDTAIEVINATTGKDELGRPSR----------LCKHALYCRWMRVHGKVPPHL---L 722

  Fly   342 DQQLSDPERIAYASCKDLARDYQFAWREIKEKYFL--------QWTKKPHELLDFN 389
            ..:::.|  ..|...|..|::||.|    |.:.|.        .|.:||.|...|:
  Rat   723 RTKITKP--TTYHESKLAAKEYQAA----KARLFTAFIKAGLGAWVEKPTEQDQFS 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adat1NP_001260450.1 ADEAMc 7..389 CDD:214718 119/441 (27%)
Adarb1XP_006256337.1 DSRM 143..206 CDD:238007
DSRM 299..357 CDD:238007
ADEAMc 386..772 CDD:214718 117/428 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2777
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274045at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10910
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.