DRSC/TRiP Functional Genomics Resources

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Protein Alignment Adat1 and adarb1

DIOPT Version :9

Sequence 1:NP_001260450.1 Gene:Adat1 / 34787 FlyBaseID:FBgn0028658 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_031748314.1 Gene:adarb1 / 100124739 XenbaseID:XB-GENE-954085 Length:756 Species:Xenopus tropicalis


Alignment Length:409 Identity:114/409 - (27%)
Similarity:185/409 - (45%) Gaps:69/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAELCLKKFESLPKTGKPTANQWTILAGIV-EFNRNTEACQLVSLGCGTKCIGESKLCPNGLILN 75
            ::.|.:.||..|.........:..:|||:| ....:.:..|::.:..|||||....:...||.||
 Frog   383 VSRLVVDKFSDLTDNFTSPHARRKVLAGVVMTTGTDVKDAQVICVSTGTKCINGEYMSDRGLALN 447

  Fly    76 DSHAEVLARRGFLRFLYQELK--------QDRIFHWNSTLSTYDMDEHVEFHFLSTQTPCGDACI 132
            |.|||:::||..:||||.:|:        |.|.....|....:.:.::|:||...:.:|||||.|
 Frog   448 DCHAEIISRRSLVRFLYTQLELFLSTKEDQQRSIFMKSERGGFKLKDNVQFHLYISTSPCGDARI 512

  Fly   133 L------EEEQPAARAKRQRLDEDSEMVYTGAKLISDLSDDPMLQTPGALRTKPGRGERTLSMSC 191
            .      :|:|......|:...:....:.:|...|...|...:....|.|     :|||.|:|||
 Frog   513 FSPHEAGQEDQGDRHPNRKARGQLRTKIESGEGTIPVRSSSTIQTWDGVL-----QGERLLTMSC 572

  Fly   192 SDKIARWNVIGVQGALLDVLISKPIYFSSLNFCCDDAQL---ESLERAIFKRF-DCRTFKHTRFQ 252
            |||:|||||:|:||:||.:.: :|||.||:..    ..|   :.|.||:::|. |.....|. :.
 Frog   573 SDKLARWNVVGIQGSLLSLFV-EPIYLSSIIL----GSLYHGDHLSRAVYQRISDIEDLPHL-YA 631

  Fly   253 PQRPQIN-------IDPGIRFEFSQRSDWQPSPNGLIWSQVPEELRPYEISVNGKRQGVTKKKMK 310
            ..:|.::       ..||....||  .:|....:||            |: :|     .|..|.:
 Frog   632 LNKPLLSGISNAEARQPGKAPSFS--VNWAVGDSGL------------EV-IN-----ATTGKDE 676

  Fly   311 TSQAALAISKYKLFLTFLELVKFNPKLSEMFDQQLSDPERIAYASCKDLARDYQFAWREIKEKYF 375
            ..:|: .:.|:.|:..::   :.:.|||.....::.  :...|...|..|.:||.| :|...|.|
 Frog   677 MGRAS-RLCKHALYSRWM---RIHAKLSSSVRCKIG--KLNVYHDTKHSAVEYQSA-KECVFKVF 734

  Fly   376 LQ-----WTKKPHELLDFN 389
            .:     |.|||.|...|:
 Frog   735 QKSGLGAWVKKPIEQDQFS 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Adat1NP_001260450.1 ADEAMc 7..389 CDD:214718 113/407 (28%)
adarb1XP_031748314.1 DSRM_RED1_rpt1 132..203 CDD:380724
DSRM_RED1_rpt2 288..357 CDD:380727
ADEAMc 378..753 CDD:214718 113/407 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D274045at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2305
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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