DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH1 and ca15b

DIOPT Version :9

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_005169499.1 Gene:ca15b / 791844 ZFINID:ZDB-GENE-040426-2222 Length:320 Species:Danio rerio


Alignment Length:290 Identity:87/290 - (30%)
Similarity:132/290 - (45%) Gaps:58/290 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NGPAHWAKEYPQAS-------------GHRQSPVDITPSSAKKGSELNVAPLKWKYVPEHTKS-- 60
            :|...|....|..|             |.:|||::|..::.|..:.|.    .:.||..:..:  
Zfish    21 SGSISWCYHSPSCSEVTWPIIAEKHCNGTQQSPINIVTANVKANANLT----SFTYVGYNDSTAL 81

  Fly    61 --LVNPGYCWRVDVNGADSELTGGPLGDQIFKLEQFHCHWGCTDS-KGSEHTVDGVSYSGELHLV 122
              :.|.|...:|.::.....:.||.|..: |...:||.|||...: .||||||:|..:..|||:|
Zfish    82 TVIKNTGTSIQVTLDPKKMRVAGGNLPGR-FASTEFHLHWGNGSAMPGSEHTVNGKRFPMELHIV 145

  Fly   123 H---WNTTKYKSFGEAAAAPDGLAVLGVFLKAGNHHAELDK---VTSLLQFVLHKGDRVTLPQGC 181
            :   .||:            |.|||||||::|.|...:.:.   :||.|..::..||:.:|.:..
Zfish   146 NKPVSNTS------------DSLAVLGVFIEASNETGKPESWKTLTSYLTRIVKAGDKASLFRNF 198

  Fly   182 DPGQLLPDVH--TYWTYEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRN---LNAYDVKEECP 241
            ....||..|.  .|:.|.||||||.|:|.|||.|||.||.||.|.::....   :|         
Zfish   199 SMDDLLSGVDRTKYYRYLGSLTTPNCNEGVIWTVFKDPIRVSRDLIDLFSTTVYIN--------- 254

  Fly   242 CNEFNGKVINN-FRPPLPL-GKRELREIGG 269
             |..|..::.| ||...|: |:..:.::.|
Zfish   255 -NSSNSPLMTNIFRSVQPVNGRIVMSQVAG 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 5..263 CDD:215000 86/282 (30%)
ca15bXP_005169499.1 alpha_CA_IV_XV_like 48..279 CDD:239391 82/257 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.