DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH1 and CA3

DIOPT Version :9

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_005172.1 Gene:CA3 / 761 HGNCID:1374 Length:260 Species:Homo sapiens


Alignment Length:267 Identity:109/267 - (40%)
Similarity:147/267 - (55%) Gaps:13/267 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHHWGYTEENGPAHWAKEYPQASGHRQSPVDITPSSAKKGSELNVAPLKWKYVPEHTKSLVNPG 65
            |:..|||...|||.||.:.:|.|.|..||||::.....:....|.  |....|.....|:::|.|
Human     1 MAKEWGYASHNGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQ--PWSVSYDGGSAKTILNNG 63

  Fly    66 YCWRV--DVNGADSELTGGPLGDQIFKLEQFHCHWGCTDSKGSEHTVDGVSYSGELHLVHWNTTK 128
            ...||  |.....|.|.||||... ::|.|||.|||.:|..|||||||||.|:.|||||||| .|
Human    64 KTCRVVFDDTYDRSMLRGGPLPGP-YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWN-PK 126

  Fly   129 YKSFGEAAAAPDGLAVLGVFLKAGNHHAELDKVTSLLQFVLHKGDRVTLPQGCDPGQLLPDVHTY 193
            |.:|.||....||:||:|:|||.|:.:.|.......|..:..||......: .||..|.|....|
Human   127 YNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIKTKGKEAPFTK-FDPSCLFPACRDY 190

  Fly   194 WTYEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRNLNAYDVKEECPCNEFNGKVINNFRPPLP 258
            |||:||.|||||.|.::|::.|.|:.||.||:..:|:|.: ..:.|.|.     .:::|:|||.|
Human   191 WTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLS-SAENEPPV-----PLVSNWRPPQP 249

  Fly   259 LGKRELR 265
            :..|.:|
Human   250 INNRVVR 256

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 5..263 CDD:215000 106/259 (41%)
CA3NP_005172.1 alpha_CA_I_II_III_XIII 1..259 CDD:239393 109/267 (41%)
Involved in proton transfer 64..67 0/2 (0%)