DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH1 and Ca8

DIOPT Version :10

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001009662.1 Gene:Ca8 / 297814 RGDID:1304709 Length:290 Species:Rattus norvegicus


Alignment Length:269 Identity:101/269 - (37%)
Similarity:147/269 - (54%) Gaps:19/269 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WGYTEENGPAHWAKEYPQASGHRQSPVDITPSSAKKGSELNVAPLKWKYVPEHTKSLVNPGYCWR 69
            |||.|   ...|...:|.|:|..|||:::....|:....|....|...||......:.|.|:..:
  Rat    29 WGYEE---GVEWGLVFPDANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTNDGHTIQ 90

  Fly    70 VDVNGADSELTGGPLGD-QIFKLEQFHCHWGCTDSKGSEHTVDGVSYSGELHLVHWNTTKYKSFG 133
            | :..:.|.|:||||.. |.|:|.:...|||..:.:||||||:..::..||||:|||:|.:.|..
  Rat    91 V-ILKSKSVLSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPMELHLIHWNSTLFGSID 154

  Fly   134 EAAAAPDGLAVLGVFLKAGNHHAELDKVTSLLQFVLHKGDRVTLPQGC-DPGQLLPD--VHTYWT 195
            ||...|.|:.::.:|::.|..|..|..||.:||.:.:||...|:|  | :|..||||  :..||.
  Rat   155 EAVGKPHGIVIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIP--CFNPNTLLPDPLLRDYWV 217

  Fly   196 YEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRNLNAY----DVKEECPCNEFNGKVINNFRPP 256
            ||||||.|||||.|.||:|:.|:.:|..|:...|.|..:    ::.|.|     :|.:.:||||.
  Rat   218 YEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAELVEGC-----DGILGDNFRPT 277

  Fly   257 LPLGKRELR 265
            .||..|.:|
  Rat   278 QPLSDRVIR 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 11..265 CDD:459707 96/261 (37%)
Ca8NP_001009662.1 alpha_CARP_VIII 35..289 CDD:239394 97/260 (37%)

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