DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH1 and cah-6

DIOPT Version :9

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_491189.1 Gene:cah-6 / 189049 WormBaseID:WBGene00000284 Length:319 Species:Caenorhabditis elegans


Alignment Length:251 Identity:81/251 - (32%)
Similarity:119/251 - (47%) Gaps:21/251 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GHRQSPVDITPSSAKKGSELNVAPLKWKYVPEHTKSLVNPGYCWRVDVNGADSELTGGPLGDQIF 89
            |..|||:||.|.....|..|..|..:..|........||.|....:...|..|||....|.::.:
 Worm    65 GRTQSPIDIVPVITAFGEHLQNAHFEVTYESTGEFKAVNDGNSIWLMREGNSSELAISFLPEEQY 129

  Fly    90 KLEQFHCHWGCTDSKGSEHTVDGVSYSGELHLVHWNTTKYKSFGEAAAAPDGLAVLGVFL-KAGN 153
            .|:..:.||......|||||:.||.|:||:||:|.| |::.:..:|...|:|:..:.||| ::.:
 Worm   130 HLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRN-TRFATMADALKQPNGVIAIAVFLNESHD 193

  Fly   154 HHAELDKVTSLLQFVLHKGDRVTLPQGC--DPGQLLP---DVHTYWTYEGSLTTPPCSESVIWIV 213
            .:|....:.:||..|::||....|   |  |.....|   ....:|.||||.||.|..|:|.|||
 Worm   194 DNAVFSPLINLLPQVIYKGSECKL---CSFDFQTFFPVAEKTKEFWMYEGSETTDPFRETVNWIV 255

  Fly   214 FKTPIEVSDDQLNAMRNLNA--YDVKEECPCNEFNGKVINNFRPPLPLGKRELREI 267
            .:..:.:|..||:.:|.:.|  ||       .||:.||  ..:|..|:.....|.|
 Worm   256 IRAALPISSHQLDKLREVRAGRYD-------EEFSDKV--PMKPLRPIQNPSSRTI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 5..263 CDD:215000 79/245 (32%)
cah-6NP_491189.1 alpha_CARP_receptor_like 56..304 CDD:239396 81/251 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48615
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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