DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH1 and cah-2

DIOPT Version :9

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_495567.3 Gene:cah-2 / 174218 WormBaseID:WBGene00000280 Length:337 Species:Caenorhabditis elegans


Alignment Length:279 Identity:85/279 - (30%)
Similarity:124/279 - (44%) Gaps:41/279 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GPAHWAKEYPQ----ASGHRQSPVDITPSSAKKGSEL---NVAPLKWKYVPEHT--------KSL 61
            ||..|...:..    .:|..||||:|.||.......|   |:.....:.|.|:|        |.|
 Worm    16 GPDFWGLLHGDWRMCTAGQMQSPVNIDPSQLLYDPHLMPINIEGNIVEAVFENTGQLPVVTVKDL 80

  Fly    62 VNPGYCWRVDVNGADSELTGGPLGDQIFKLEQFHCHWGCTD--SKGSEHTVDGVSYSGELHLVHW 124
            .|     |..:|     :||||.....:||.|...|:|..|  .||||||||.|.:..|:.|:.:
 Worm    81 PN-----RPTIN-----ITGGPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAY 135

  Fly   125 NTTKYKSFGEAAAAPDGLAVLGVFLKAG-NHHAELDKVTSLLQFVLHKGDRVTLPQGCDPGQLLP 188
            |:..|.:|..|..:|.||..:.|.:..| ....||.::|...|.:.:||....|.. ..|..|||
 Worm   136 NSALYPNFSVAMTSPRGLLAVSVIVDIGKTTSVELRRLTVASQSINYKGQTTNLTD-FQPSALLP 199

  Fly   189 DVHTYWTYEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRNLNAYDVKEE---------CPCNE 244
            ....|.|||||||.|.|.|:|.|::...||.:::|.|.....:...:.|:.         .|...
 Worm   200 KTSHYVTYEGSLTFPGCHETVTWVILNNPIYITNDDLQIWNEMQKTETKQPEPSYMTPAYRPLKS 264

  Fly   245 FNGKVINNFRPPLPLGKRE 263
            .||:::   |..:.:|.::
 Worm   265 LNGRLV---RTNINVGSKQ 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 5..263 CDD:215000 85/277 (31%)
cah-2NP_495567.3 alpha_CARP_X_XI_like 16..275 CDD:239395 84/272 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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