DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH1 and ca10

DIOPT Version :9

Sequence 1:NP_523561.1 Gene:CAH1 / 34786 FlyBaseID:FBgn0027844 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_031750638.1 Gene:ca10 / 100493207 XenbaseID:XB-GENE-949649 Length:328 Species:Xenopus tropicalis


Alignment Length:295 Identity:86/295 - (29%)
Similarity:138/295 - (46%) Gaps:63/295 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WGYTE-ENG-----PAHWAKEYPQ----ASGHRQSPVDI-----------TPSSAKKGSELNVAP 48
            |.|.| ..|     |:.|......    |.|.|||||:|           ||.....|..     
 Frog    33 WTYKEVVQGSFVPVPSFWGLVNSAWNLCAVGKRQSPVNIETSHMIFDPFLTPLRINTGGR----- 92

  Fly    49 LKWKYVPEHTKSLVNPG--YCWRVD----VNGADSELTGGPLGDQIFKLEQFHCHWGCTDSKGSE 107
                   :.:.::.|.|  ...|:|    ||     ::|||| ....:||:...|:|..|.:|||
 Frog    93 -------KVSGTMYNTGRHVSLRLDKEHLVN-----ISGGPL-TYSHRLEEIRLHFGSEDGQGSE 144

  Fly   108 HTVDGVSYSGELHLVHWNTTKYKSFGEAAAAPDGLAVLGVFLKAG-------NHHAELDKVTSLL 165
            |.::|.::|||:.|:|:|...|.:..:||.:|:||.|:.:|:|..       |.....|.:|.  
 Frog   145 HLLNGQAFSGEVQLIHYNHELYTNVTDAAKSPNGLVVISIFIKVTDSSNLFLNRMLNRDTITR-- 207

  Fly   166 QFVLHKGDRVTLPQGCDPGQLLPDVHTYWTYEGSLTTPPCSESVIWIVFKTPIEVSDDQLNAMRN 230
              :.:|.|...| ||.:..::.|:..::.||:||:|.|||.|:..||:...||.::..|::::|.
 Frog   208 --ITYKNDAYLL-QGLNIEEIYPETSSFITYDGSMTIPPCYETASWIIMNKPIYITRMQMHSLRL 269

  Fly   231 LNAYDVKEECPCNEFNGKVINNFRPPLPLGKRELR 265
            |:     :..|...|: .:.:||||...|..|.:|
 Frog   270 LS-----QNQPSQIFS-SMSDNFRPVQSLNNRCIR 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH1NP_523561.1 Carb_anhydrase 5..263 CDD:215000 84/291 (29%)
ca10XP_031750638.1 alpha_CARP_X_XI_like 46..302 CDD:239395 82/282 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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