DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and GEA1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_012565.1 Gene:GEA1 / 853488 SGDID:S000003792 Length:1408 Species:Saccharomyces cerevisiae


Alignment Length:1696 Identity:355/1696 - (20%)
Similarity:625/1696 - (36%) Gaps:488/1696 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KKSCDSALEQIKAELISAGQ----------IAEGNELPCAA-----------LPLPKNDAASI-- 76
            |:|.|.:...: |.|:..|.          :...:.||.::           |.|..||...:  
Yeast    31 KQSRDKSQTSV-AALLGGGSDIFLSQSDSFVDSFHNLPTSSYHDPLISGLVQLRLKINDLKGLDS 94

  Fly    77 INAETYFLPF--ELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTIYGC 139
            :||.....||  .::..|.|......|||.|||:.....:..:..|.    .:.:...||.:..|
Yeast    95 LNALELLKPFLEIVSASSVSGYTTSLALDSLQKVFTLKIINKTFNDI----QIAVRETVVALTHC 155

  Fly   140 -FSGPQ--TDEAVQLQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQT------- 194
             |...:  :|::|.|:::..|..::||...:....|::      ||:..::.:|...|       
Yeast   156 RFEASKQISDDSVLLKVVTLLRDIITSSFGDYLSDTII------YDVLQTTLSLACNTQRSEVLR 214

  Fly   195 -TARATLTQMLNVIFARMENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDS---DEVIASELL 255
             ||..|:..:...:|.:::    .|.||..  |...|:        :||..|:   |::|.:   
Yeast   215 KTAEVTIAGITVKLFTKLK----LLDPPTK--TEKYIN--------DESYTDNNLKDDIIGT--- 262

  Fly   256 AEIISAAYNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVE-------------LHSENDAVVTAK 307
                                   |.:.||.||..|..:|.             ...|||.....|
Yeast   263 -----------------------TTSDNDLSSTDDDSAVADDNKNEKPVQQVIREQENDEETAEK 304

  Fly   308 FTHILQKDAFLVFRALCKLSMK-PLPDGHPDPKSHELRSKVLSLHLLLLILQNAG---------- 361
            ..::.......|.:....|.:. .:|:..   ..|...:..|||.|:...::.:|          
Yeast   305 AENVEPNYGITVIKDYLGLLLSLVMPENR---MKHTTSAMKLSLQLINAAIEISGDKFPLYPRLF 366

  Fly   362 -----PVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFK 421
                 |:|:|....|.:..||              .:.:.:|.:|.:|:.....:|..|||:..:
Yeast   367 SLISDPIFKSVLFIIQSSTQY--------------SLLQATLQLFTSLVVILGDYLPMQIELTLR 417

  Fly   422 EIFLNILEANSSSFEHKWMVIQALTRICADAQSV---------VDIYVNYDCDFSAANLFERLVN 477
            .|| .|||..:.|.:.......|:..:..:..|:         :.::||:||:...::|....:.
Yeast   418 RIF-EILEDTTISGDVSKQKPPAIRELIIEQLSILWIHSPAFFLQLFVNFDCNLDRSDLSIDFIK 481

  Fly   478 DLSKIAQGRQALELGAN--PMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPT 540
            :|:|.:....|:....|  |:           ||..:|..:.....||                 
Yeast   482 ELTKFSLPAAAVNTSNNIPPI-----------CLEGVLSLIENIYNDL----------------- 518

  Fly   541 STEQDQADTTIQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQ 605
             ...|:|:..             .||:::    :.|::|..:.|.: ..:|.||.|.:||:|.|.
Yeast   519 -QRFDRAEFV-------------KNQKEI----DILKQRDRKTEFI-LCVETFNEKAKKGIQMLI 564

  Fly   606 EKQLLGATCG-DIARWLH-EDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFL 668
            ||..:.:... |||.:|. .:.||:|..||..:  .|.....::..:||.|||:.:.|..|:|.|
Yeast   565 EKGFIDSDSNRDIASFLFLNNGRLNKKTIGLLL--CDPKKTSLLKEFIDLFDFKGLRVDEAIRIL 627

  Fly   669 LEGFRLPGEAQKIDRLMEKFASRYC--ECNPKNQLFQ---------------------SADTVYV 710
            |..||||||:|:|:|::|.|:|:|.  :.|.|.:|..                     .||:|:|
Yeast   628 LTKFRLPGESQQIERIVEAFSSKYSADQSNDKVELEDKKAGKNGSESMTEDDIIHVQPDADSVFV 692

  Fly   711 LAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGM 775
            |::|||||.||.|:||||..||.:.|....||..:.| |.|..||..||..|...||.|..    
Yeast   693 LSYSIIMLNTDSHNPQVKDHMTFDDYSNNLRGCYNGK-DFPRWYLHKIYTSIKVKEIVMPE---- 752

  Fly   776 LQQAKPTGKQAFITEKRRKLLWNMEMEVISLTATNLMQSVS---HVKSPFTSAKHLEHVRPMFKM 837
                :..|.:.:..:     .||           ||:.|.|   .::..||:        |:.|:
Yeast   753 ----EHHGNERWFED-----AWN-----------NLISSTSVMTEMQRDFTN--------PISKL 789

  Fly   838 AWTPFL----AAFSVGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALAR-FTLLNA 897
            |....|    |.|                                |..||..::.|.: ||:.::
Yeast   790 AQIDILQYEKAIF--------------------------------SNVRDIILKTLFKIFTVASS 822

  Fly   898 NSPINEMKAKNIDTIKTLIMVAHTDGNYLGS---SWLDIVKCISQLELAQLIGTGVRPQFLSGAQ 959
                :::..:.:|.|.....:     ||..|   |:.|.|     |.|.::         .:.||
Yeast   823 ----DQISLRILDAISKCTFI-----NYYFSFDQSYNDTV-----LHLGEM---------TTLAQ 864

  Fly   960 TTLK------DSLNPSVKEHIGETSSQSVVVAVDRIFTGSMRLDGDAIVDFVKALCQVSVDELQQ 1018
            ::.|      ||: |.|:..:.:|.|: :.|:...|..|.         :|...||.|       
Yeast   865 SSAKAVELDVDSI-PLVEIFVEDTGSK-ISVSNQSIRLGQ---------NFKAQLCTV------- 911

  Fly  1019 QQPRMFSLQKIVEISYYNMERIRLQWSRIWQVLGEHFNAVGCNSNEEISFFA-LDSLRQLSMKFM 1082
                 ...|.|.|||..::...|| |::|.|::.:.|..:....|  :.||. ..||.:|....:
Yeast   912 -----LYFQIIKEISDPSIVSTRL-WNQIVQLILKLFENLLMEPN--LPFFTNFHSLLKLPELPL 968

  Fly  1083 EKGEFS--NFRFQKDFLRPFEHIMKKNASPAIRDM-----VVRCIAQMVNSQAHNIRSGWKNIFS 1140
            ...:.|  ..:..:..|..|...:|.:..|:..|:     ...|:     ..:|.:.       |
Yeast   969 PDPDISIRKAKMSRSLLSTFASYLKGDEEPSEEDIDFSIKAFECV-----KASHPLS-------S 1021

  Fly  1141 IFHLAAGDNEEPIVELAFQTTGKIIGDLYKRQFAIMVDSFQDAVKCLSEFATARFPDTSMEAIRL 1205
            :|     :|.:.:.....:|   ::..|...:.:.....|:..:..|.|.:.....:.|..    
Yeast  1022 VF-----ENNQLVSPKMIET---LLSSLVIEKTSENSPYFEQELLFLLEISIILISEASYG---- 1074

  Fly  1206 VRTCAQCVHEAPQLFAEH-AGMENDASVAEEDRVWVRGWFPMLFSLSCVVNRCKL--DVRTRALT 1267
                    .|...|.|:| ..:.|...:::|....:..:  .:|.:|...|...:  |:......
Yeast  1075 --------QEFGALIADHMINISNLDGLSKEAIARLASY--KMFLVSRFDNPRDILSDLIEHDFL 1129

  Fly  1268 VLFEIVKT-YGESFKPHWWKDLFNVIFRIFDNMKLPEHVTEKSE-W-------MTTTCNHALYAI 1323
            |..||..| |.||   .|.|.:.|.:|...:::|..|...:..: |       .......|:|..
Yeast  1130 VKNEIFNTKYYES---EWGKQVINDLFTHLNDVKYNERALKNVKFWNFLRILISAKDRQFAVYTF 1191

  Fly  1324 IDVFTQYFDVL---GHL-----LLEELFAQ----LHWCVQQSNEQLARSGTNCLENLVISNGFKF 1376
            ::.:.|..|:.   |:.     ||:|:...    ..|  :|:.|.....|....|    ||.:: 
Yeast  1192 LEKYIQNGDIFVDDGNFMNILSLLDEMSCAGAVGTKW--EQNYENSVEDGCEAPE----SNPYR- 1249

  Fly  1377 NESTWDKTCQCILDIFNAT--LPQDLLSWRPKAHSSNNIPQEHNHFEALHIRCV-----VQLELI 1434
                      .|:|:.:.:  :..||||...:::|:.|..:.....:.|..:|:     :.::.:
Yeast  1250 ----------SIIDLSSRSINITADLLSTVGRSNSALNKNEIIAAIQGLAHQCLNPCDELGMQAL 1304

  Fly  1435 QTMDNIVFFPATSRKEDAETLAQAAADLTGGRSGSQSQLLECQREEQGMYGYLRTRQLLTLADCL 1499
            |.::||:...|:..:.:     :.|.|          .|||.        |.|...:|..:.|..
Yeast  1305 QALENILLSRASQLRTE-----KVAVD----------NLLET--------GLLPIFELDEIQDVK 1346

  Fly  1500 MQSHRFAKRFNADHDQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKMYGDENRRSDWPGIE 1564
            |      ||..:.....|.:    |.|.:...:...||  ...||.:|       |:..|.|.:|
Yeast  1347 M------KRITSILSVLSKI----FLGQLVEGVTSNET--FLRVLNVF-------NKYVDDPTVE 1392

  Fly  1565 QELVQV 1570
            ::|.::
Yeast  1393 RQLQEL 1398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 355/1696 (21%)
DCB 30..212 CDD:292830 44/212 (21%)
Sec7_N 312..465 CDD:289549 33/177 (19%)
Sec7 582..767 CDD:279680 77/209 (37%)
DUF1981 1080..1161 CDD:286414 11/87 (13%)
GEA1NP_012565.1 COG5307 283..1325 CDD:227623 269/1281 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344271
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.