DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and GNL1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001318705.1 Gene:GNL1 / 833946 AraportID:AT5G39500 Length:1443 Species:Arabidopsis thaliana


Alignment Length:1503 Identity:348/1503 - (23%)
Similarity:641/1503 - (42%) Gaps:302/1503 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KILADKDIRRSHHSQLKKSCDSALEQIKAELISAGQIAEGNELPCAALPLPKNDAASIINAETYF 83
            :.:||.|       ||:.|...:|::::.::.|    .:.|              ...::...|.
plant    53 RYIADDD-------QLEHSLIHSLKELRKQIFS----WQSN--------------WQYVDPRLYI 92

  Fly    84 LPF---ELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSANPG---HLLIDRIVVTIYGC--- 139
            .||   .|:.::.:| |...||..:.|::.....|   .::.|.|   |:::|    .:..|   
plant    93 QPFLDVILSDETGAP-ITGVALSSVYKILTLEVFT---LETVNVGEAMHIIVD----AVKSCRFE 149

  Fly   140 FSGPQTDEAVQLQIIKALLTVVTSQHVE-IHEFTLLQAVRTCYDI--YLSSKNLVNQTTARATLT 201
            .:.|.::|.|.::|::.||..|.|:... :....:...|.||..:  ..|||:.:.|..||.|:.
plant   150 VTDPASEEVVLMKILQVLLACVKSKASNGLSNQDICTIVNTCLRVVHQSSSKSELLQRIARHTMH 214

  Fly   202 QMLNVIFARM--------------ENQVYELP-PPNSNP---TNGSIHS-EDCNGSGEESLRDSD 247
            :::..||:::              :|:|..:. .|||..   .||:|.| .|..|:      |.|
plant   215 ELIRCIFSQLPFISPLANECELHVDNKVGTVDWDPNSGEKRVENGNIASISDTLGT------DKD 273

  Fly   248 EVIASELLAEIISAAYNEAMKDQESVGEPEPTLNGNDYSSH-SDHDSVELHSENDAVVTAKFTHI 311
            :. :||::.                   ||..|..::..:. ||..:...:.||..:.......:
plant   274 DP-SSEMVI-------------------PETDLRNDEKKTEVSDDLNAAANGENAMMAPYGIPCM 318

  Fly   312 LQKDAFLVFRALCKLSMKPLPDGHPDPKSHELR----SKVLSLHLLLLILQNAGPVFRSNEMFIM 372
            ::     :|..||.| :....:|..:.:|:.:.    ..:.:|.|:...::..||.||.:...:.
plant   319 VE-----IFHFLCTL-LNVGENGEVNSRSNPIAFDEDVPLFALGLINSAIELGGPSFREHPKLLT 377

  Fly   373 AIKQYLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEA-NSSSFE 436
            .|:..|...|...|:|:.|.:.....||.:.|..|.:..||.|:|.||..:.|.|.:: :.||::
plant   378 LIQDDLFCNLMQFGMSMSPLILSTVCSIVLNLYLNLRTELKVQLEAFFSYVLLRIAQSKHGSSYQ 442

  Fly   437 HKWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQE--K 499
            .:.:.::||..:|.....:.:::.|:|||.:.:|:||.:.|.|||          .|.|:..  .
plant   443 QQEVAMEALVDLCRQHTFIAEVFANFDCDITCSNVFEDVSNLLSK----------NAFPVNGPLS 497

  Fly   500 SMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTTIQTMHSGSSHSLNS 564
            :|.|..|:.|:|:::.|.|     .|...:|...:    ||..|:.:...|::..:.|..:..  
plant   498 AMHILALDGLISMVQGMAE-----RVGEELPASDV----PTHEERYEEFWTVRCENYGDPNFW-- 551

  Fly   565 NQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGA-------------TCGD 616
                   :|...:.:.::|::| .|.:.|||.|.||:|:||...||..             ||| 
plant   552 -------VPFVRKVKHIKKKLM-LGADRFNRDPNKGLQYLQGVHLLPEKLDPKSVACFFRYTCG- 607

  Fly   617 IARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKI 681
                      |||.|:|:::|.:|....:|:..:...|||:.|.:..|||..:..|:|.||||||
plant   608 ----------LDKNVMGDFLGNHDQFCIQVLHEFAKTFDFQNMNLATALRLFVGTFKLSGEAQKI 662

  Fly   682 DRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDS 746
            .|::|.|:.||.|.:|  .:....|..:|||:|||:|.||.|:.|||.:||:|.:|:.||.|:..
plant   663 HRVLEAFSERYYEQSP--HILIDKDAAFVLAYSIILLNTDQHNAQVKTRMTEEDFIRNNRTINGG 725

  Fly   747 KSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNMEMEVISLTATNL 811
             :|||.||||.||..|...||:|..:.|       ||.|.                   :||:..
plant   726 -ADLPREYLSEIYHSIRHSEIQMDEDKG-------TGFQL-------------------MTASRW 763

  Fly   812 MQSV--SHVKSPF---TSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIR 871
            :..:  |...||:   .:|.||:  |.||.:...|.:||.||..:..:..::...|:||:....:
plant   764 ISVIYKSKETSPYIQCDAASHLD--RDMFYIVSGPTIAATSVVFEQAEQEDVLRRCIDGLLAIAK 826

  Fly   872 IACIFHMSLERDAYVQALARFT----LLNANSPI----NEMKAKNIDTIKTLIMVAHTDGNYLGS 928
            ::..:|::...|..|.:|.:||    .|:|:..:    .:.:|:.  ..:.:.::|:..|:|:.:
plant   827 LSAYYHLNSVLDDLVVSLCKFTPFFAPLSADEAVLVLGEDARARM--ATEAVFLIANKYGDYISA 889

  Fly   929 SWLDIVKCISQLELAQLIGTGVR------PQFLSGAQTTLKDSLNP--------------SVKEH 973
            .|.:|::|:..|....::...:.      |:..:......|.|.||              .....
plant   890 GWKNILECVLSLNKLHILPDHIASDAADDPELSTSNLEQEKPSANPVPVVSQSQPSAMPRKSSSF 954

  Fly   974 IG---------ETS---SQSVVVA------------VDRIFTGSMRLDGDAIVDFVKALCQVS-V 1013
            ||         ||.   |:..:.|            :|.||:.|..|..:::...|.:|.:.| .
plant   955 IGRFLLSFDSEETKPLPSEEELAAYKHARGIVKDCHIDSIFSDSKFLQAESLQQLVNSLIRASGK 1019

  Fly  1014 DELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQ-VLG-EHFNAVGCNSNEEISFFALDSLRQ 1076
            ||...    :|.|:.::.::..|.:||.|.|..::: :|| .......|...|:..|..|...::
plant  1020 DEASS----VFCLELLIAVTLNNRDRILLIWPTVYEHILGIVQLTLTPCTLVEKAVFGVLKICQR 1080

  Fly  1077 LSMKFMEKGEFSNFRFQKDFLRPFEHIMKKNA--SPAIRDMVVRCIAQMVNSQAHNIRS--GWKN 1137
            | :.:.|       ....:.|:..:.::|..|  :.|..:.:.:.:.::|.:.|.::||  ||:.
plant  1081 L-LPYKE-------NLTDELLKSLQLVLKLKAKVADAYCERIAQEVVRLVKANASHVRSRTGWRT 1137

  Fly  1138 IFSIFHLAAGDNEEPIVELAFQTTGKIIGD---LYKRQFAIMVDSFQDAVKCLSEFATARF--PD 1197
            |.|:..:.|...|..  |..|:....|:.:   |....:.:.:|:       .|.||.:|.  .|
plant  1138 IISLLSITARHPEAS--EAGFEALRFIMSEGAHLLPSNYELCLDA-------ASHFAESRVGEVD 1193

  Fly  1198 TSMEAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSLSCVVNRCKLDVR 1262
            .|:.||.|:.....|:....|......| |.||.:...:.:. :.|..::.:|..|....:.:||
plant  1194 RSISAIDLMSNSVFCLARWSQEAKNSIG-ETDAMMKLSEDIG-KMWLKLVKNLKKVCLDQRDEVR 1256

  Fly  1263 TRALTVLFEIVKTYGESF--KPHWWKDLFNVIFRIFDNMKLPEHVTEKSEWMTTTCNHALYAIID 1325
            ..|:::|...:.......  :|.|::...:.:|.:.|:: |...:....:.:..|....|     
plant  1257 NHAISMLQRAIAGADGIMLPQPLWFQCFDSAVFILLDDV-LTFSIENSRKTLKKTVEETL----- 1315

  Fly  1326 VFTQYFDVLGHLLLEELFAQLHWCVQQSNEQ--LARSGTNCLENLVISNGFKFNESTWDKTCQCI 1388
                   ||...|:.:.|.|   .:|..::|  ..|.....|..|......:|.....:|..:.|
plant  1316 -------VLATKLMSKAFLQ---SLQDISQQPSFCRLWVGVLNRLETYMSTEFRGKRSEKVNELI 1370

  Fly  1389 LDIFNATL 1396
            .::...||
plant  1371 PELLKNTL 1378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 348/1503 (23%)
DCB 30..212 CDD:292830 41/207 (20%)
Sec7_N 312..465 CDD:289549 37/157 (24%)
Sec7 582..767 CDD:279680 78/197 (40%)
DUF1981 1080..1161 CDD:286414 17/84 (20%)
GNL1NP_001318705.1 PLN03076 <352..>1295 CDD:215560 258/1038 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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