DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and GNL2

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_197462.1 Gene:GNL2 / 832081 AraportID:AT5G19610 Length:1375 Species:Arabidopsis thaliana


Alignment Length:1488 Identity:311/1488 - (20%)
Similarity:583/1488 - (39%) Gaps:365/1488 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 CDSALEQ----IKAELISAGQIAEGNELPCAALPLPKNDAASIINAETYFLPF-ELACKSRSP-R 96
            |||:::|    ::|.:.:                 |:.|..: |:...|..|| |:......| .
plant    47 CDSSVQQSLKSLRALIFN-----------------PQQDWRT-IDPSVYLSPFLEVIQSDEIPAS 93

  Fly    97 IVVTALDCLQKLIAYGHLTGSIQDSANPGHL-LIDRIVVTIYGCFSGPQTD----EAVQLQIIKA 156
            ....||..:.|::..     .|.|...||.. .::.||..|..| ...:||    :||.::|::.
plant    94 ATAVALSSILKILKI-----EIFDEKTPGAKDAMNSIVSGITSC-RLEKTDLVSEDAVMMRILQV 152

  Fly   157 LLTVVTSQHVE-IHEFTLLQAVRTCYDIYLSS--KNLVNQTTARATLTQMLNVIFARMENQVYEL 218
            |..::.....| :.:..:...|.||:.:...|  :..:.|...|.|:.:::.:||:|:.:  :| 
plant   153 LTGIMKHPSSELLEDQAVCTIVNTCFQVVQQSTGRGDLLQRNGRYTMHELIQIIFSRLPD--FE- 214

  Fly   219 PPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIAS------------ELLAEIISAAYNEAMKDQE 271
                       :..::   .||:|..|:||:..|            ..|..::            
plant   215 -----------VRGDE---GGEDSESDTDEIDMSGGYGIRCCIDIFHFLCSLL------------ 253

  Fly   272 SVGEPEPTLNGNDYSSHSDHDSVELHSENDAVVTAKFTHILQKDAFLVFRALCKLSMKPLPDGHP 336
            :|.|....|.|.:           :|:.::.|                                 
plant   254 NVVEVVENLEGTN-----------VHTADEDV--------------------------------- 274

  Fly   337 DPKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIF 401
                     ::.:|.|:...::.:|.....:...:..::..|...|.:.|.|..|.|..:..|..
plant   275 ---------QIFALVLINSAIELSGDAIGQHPKLLRMVQDDLFHHLIHYGASSSPLVLSMICSCI 330

  Fly   402 VALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICADAQSVVDIYVNYDCDF 466
            :.:....:..::.|:|.||..:.|.: .|.:.....:.:.::.|...|.....:|:.|||||||.
plant   331 LNIYHFLRKFMRLQLEAFFSFVLLRV-TAFTGFLPLQEVALEGLINFCRQPAFIVEAYVNYDCDP 394

  Fly   467 SAANLFERLVNDLSKIAQGRQALELG----------ANPMQEKSMRIRGLECLVSILKCMVEWSK 521
            ...|:||                |.|          :.|:  .|::|:..|.||.::..:.:   
plant   395 MCRNIFE----------------ETGKVLCRHTFPTSGPL--TSIQIQAFEGLVILIHNIAD--- 438

  Fly   522 DLYVNPNMPVPPMQVQSPTSTEQDQADTTI-----QTMHSGSSHSLNSNQEQLQDLPEALEERKM 581
                       .|..:.....|:|..::.:     ..:|......::..:|..:...:.:..||.
plant   439 -----------NMDREEDEGNEEDDNNSNVIKPSPVEIHEYIPFWIDKPKEDFETWVDHIRVRKA 492

  Fly   582 RKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGD--IARWLHEDERLDKTVIGNYIGENDDHSK 644
            :|..:......|||..:||:::|:...|:......  :|.:......||||:||:|:|:.|:...
plant   493 QKRKLAIAANHFNRDEKKGLEYLKYNYLVSDPLDPMALASFFRFTPGLDKTMIGDYLGDPDELHL 557

  Fly   645 EVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVY 709
            .|:.::...|:|..|.:..|||..||.||||||:|||:|::|.|:.|:.: ...:.:|.|.|||:
plant   558 SVLRSFTHTFEFTGMNLDTALRTFLESFRLPGESQKIERMIEAFSERFYD-QQSSDIFASKDTVH 621

  Fly   710 VLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSG 774
            :|.:|:|||.||.|:|||:.|||::::|:.||.| ::.:|||:||||.::..|:.:...:..:||
plant   622 ILCYSLIMLNTDQHNPQVRRKMTEDEFIRNNRAI-NAGNDLPKEYLSELFQSIATNAFALSTHSG 685

  Fly   775 MLQQAKPTGKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHV-RPMFKMA 838
            .::. .|                |..:|:::.|.|.         .||:..:....: |.||...
plant   686 PVEM-NP----------------NRWIELMNRTKTT---------QPFSLCQFDRRIGRDMFATI 724

  Fly   839 WTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLE--RDAYVQALARF-TLLNA-NS 899
            ..|.:||.|...:..||.|:...|:|.:   |.||.:....||  .|..:.:..:| ||||. .:
plant   725 AGPSIAAVSAFFEHSDDDEVLHECVDAM---ISIARVAQYGLEDILDELIASFCKFTTLLNPYTT 786

  Fly   900 PINEMKAKNID---TIKTLIM--VAHTDGNYLGSSWLDIVKCISQLELAQLIGTGVRPQFL---- 955
            |...:.|.:.|   .:.||.:  :|:|.|:.:...|.:||.|:.:|...||:     ||.:    
plant   787 PEETLFAFSHDMKPRMATLAVFTLANTFGDSIRGGWRNIVDCLLKLRKLQLL-----PQSVIEFE 846

  Fly   956 -----SGAQTTLK---------------------------DSLNPSVKEHIGETSSQSVVV---A 985
                 .|:::.:.                           |::..||...:.|......|:   .
plant   847 INEENGGSESDMNNVSSQDTKFNRRQGSSLMGRFSHFLALDNVEESVALGMSEFEQNLKVIKQCR 911

  Fly   986 VDRIFTGSMRLDGDAIVDFVKALCQVSVDE-------LQQQQPRMFSLQKIVEISYYNMERIRLQ 1043
            :.:||:.|..|...|:::..::|...:..:       :::::...|....|:.|:..|:.|..:.
plant   912 IGQIFSKSSVLPDVAVLNLGRSLIYAAAGKGQKFSTAIEEEETVKFCWDLIITIALSNVHRFNMF 976

  Fly  1044 WSRIWQVLGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRF--------QKDFLRPF 1100
            |....:.|            ..::.|.|.|    .:.|:|||....||.        .:|.| |.
plant   977 WPSYHEYL------------LNVANFPLFS----PIPFVEKGLPGLFRVCIKILASNLQDHL-PE 1024

  Fly  1101 EHIMK---------KNASPAIRDMVVRCIAQMVNSQAHNIRS--GWKNIFSIFHLAAGDNEEPIV 1154
            |.|.:         |.......|.:...:::::...:.|:.:  |||::..:..|.   ...|  
plant  1025 ELIFRSLTIMWKIDKEIIETCYDTITEFVSKIIIDYSANLHTNIGWKSVLQLLSLC---GRHP-- 1084

  Fly  1155 ELAFQTTGKIIGDLYKRQFAIMVDSFQDAVKCLSEFATARFPDTSME------------AIRLVR 1207
            |...|....:||.:......:...|:...:.|...|...|  ::|:|            ...||:
plant  1085 ETKEQAVDALIGLMSFNASHLSQSSYAYCIDCAFSFVALR--NSSVEKNLKILDLMADSVTMLVK 1147

  Fly  1208 TCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSLSCVVNRCKL----DVRTRALTV 1268
            .......:....::..:...:.:|:.|.:...|.....:...||....:..|    ::|.||:|.
plant  1148 WYKTASTDTANSYSPASNTSSSSSMEENNLRGVNFVHHLFLKLSEAFRKTTLARREEIRNRAVTS 1212

  Fly  1269 LFEIVKTYGE---SFKPH---WWKDLFNVIFRIFDNM--KL-----PEHVTEKSEWMTTTCNHAL 1320
            | |...|.|.   .|.|.   :..|  :|||...|::  ||     .|:...:...|..|...|:
plant  1213 L-EKSFTMGHEDLGFTPSGCIYCID--HVIFPTIDDLHEKLLDYSRRENAEREMRSMEGTLKIAM 1274

  Fly  1321 YAIIDVFTQYFDVLGHLLLEELFAQLHW---------CVQQSNEQLARSGTNCLENLV 1369
            ..:::||..|.:    .::|....:..|         |::   ..|...|.|.|:.:|
plant  1275 KVLMNVFLVYLE----QIVESAEFRTFWLGVLRRMDTCMK---ADLGEYGDNKLQEVV 1325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 311/1488 (21%)
DCB 30..212 CDD:292830 41/187 (22%)
Sec7_N 312..465 CDD:289549 24/152 (16%)
Sec7 582..767 CDD:279680 71/186 (38%)
DUF1981 1080..1161 CDD:286414 21/99 (21%)
GNL2NP_197462.1 PLN03076 <275..>828 CDD:215560 158/616 (26%)
Sec7 493..678 CDD:396096 71/186 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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