DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and AT3G60860

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_191645.1 Gene:AT3G60860 / 825257 AraportID:AT3G60860 Length:1793 Species:Arabidopsis thaliana


Alignment Length:1855 Identity:599/1855 - (32%)
Similarity:939/1855 - (50%) Gaps:301/1855 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IVRALEKILADKDIRRSHHSQLKKSCDSALEQIKA------ELISAGQIAEGNELPCAALPLPKN 71
            :..|||||:.:...|:  ||:|...|.:.:|::.:      ...||...:|..    :::|.|.|
plant    14 VTPALEKIVKNASWRK--HSKLANECKAVIERLNSLQKSPPPSSSAATDSESE----SSVPGPLN 72

  Fly    72 DAASI----INAETYFLPFELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSANPGHLLIDRI 132
            |..||    .::|..|.|...||.:...:|:..|:||:|||||:|::.|....|.....||:.::
plant    73 DGGSIEYSLADSELIFSPLINACGTGLAKIIEPAIDCIQKLIAHGYIRGESDPSGGAESLLLFKL 137

  Fly   133 VVTIYGCFSGPQTDEAVQLQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQTTAR 197
            :.::..|..  ..||:::|.::|.||:.:.|..:.||...||..|||||||||.|||:||||||:
plant   138 IDSVCKCHD--LGDESIELPVLKTLLSAINSISLRIHGKCLLLVVRTCYDIYLGSKNVVNQTTAK 200

  Fly   198 ATLTQMLNVIFARMENQ----------VYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIAS 252
            |:|.|:|.::|.|||..          |.||..|        :...|.:|:              
plant   201 ASLIQILVIVFRRMEADSSTVPIQPIVVAELMEP--------LEKSDADGT-------------- 243

  Fly   253 ELLAEIISAAYNEAMKDQESVGEPE----------------------PTLNGNDYSSHSDHDSVE 295
              :.:.:.....:.|:|.:.|..|.                      .|.|..|....:|.|.::
plant   244 --MTQFVQGFITKIMQDIDGVLNPTMSGSGSGSGSGGQDGAYGTTTVETTNPTDLLDSTDKDMLD 306

  Fly   296 L----------------------HSENDAVVTAKFTHILQKDAFLVFRALCKLSMK-PLPDGHPD 337
            .                      .:|.|..:..:..:.|::||.|||||||||||| |..:...|
plant   307 AKYWEISMYKSALEGRKGELTDGDAERDDDLEVQIENKLRRDACLVFRALCKLSMKAPPKESSAD 371

  Fly   338 PKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIFV 402
            |:|  :|.|:|:|.||.::|:|||.|||::|.|...|||:||::|..|..|.:..:|:||.|||:
plant   372 PQS--MRGKILALELLKILLENAGAVFRTSEKFSADIKQFLCLSLLKNSASTLMIIFQLSCSIFI 434

  Fly   403 ALLSNFKVHLKRQIEVFFKEIFLNILE-ANSSSFEHKWMVIQALTRICADAQSVVDIYVNYDCDF 466
            :|::.|:..||.:|.|||..|.|.::| ....:|:.|.:|::.|.::|.|:|.:|||::|||||.
plant   435 SLVARFRAGLKAEIGVFFPMIVLRVVENVAQPNFQQKMIVLRFLDKLCLDSQILVDIFLNYDCDV 499

  Fly   467 SAANLFERLVNDLSKIAQG---RQALELGANPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPN 528
            :::|:|||:||.|.|.|||   ..|..|  .|.||.:|::..::|||:|||.|.:|..       
plant   500 NSSNIFERMVNGLLKTAQGVPPGTATTL--MPPQEAAMKLEAMKCLVAILKSMGDWLN------- 555

  Fly   529 MPVPPMQVQSPTSTEQDQADTTIQTMHSGSSHSLNSNQEQLQDLPE-------------ALEERK 580
                 .|::.|.|...:::|.....:..||....|.|.::..|..:             |:|:|:
plant   556 -----KQLRLPVSNSLNKSDVIEIDLGPGSPQLANGNADESADGSDTYSESSGGTSDALAIEQRR 615

  Fly   581 MRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKE 645
            ..|..::.||.||||||.||::||.....:|.:..:||.:|.:...|:||:||:|:||.:|.:.:
plant   616 AYKLELQEGISLFNRKPTKGIEFLINAGKVGESPEEIAGFLKDASGLNKTLIGDYLGEREDLALK 680

  Fly   646 VMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYV 710
            ||.||:|:||||.||...|:|..|||||||||||||||:|||||.|||:||||  :|.|||:.||
plant   681 VMHAYVDSFDFRGMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPK--VFTSADSAYV 743

  Fly   711 LAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGM 775
            ||:|:|||.||.|:|.||:||:.:.:|:.||||.|.| |||.:|:.|:|:.|::||||||.:...
plant   744 LAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGK-DLPADYMRSLYERITKHEIKMKEDDLR 807

  Fly   776 LQQA------KPTGKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSH--------VKSPFTSAK 826
            |||.      :..|....:....|| .|.   :..:.|:.:||:.:..        .:|.:.:|.
plant   808 LQQKQYANSNRMLGLDGILNIVIRK-QWG---DSYAETSDDLMKHMQEQFKEKARKSESTYYAAT 868

  Fly   827 HLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALAR 891
            .:..:|.|.:..|.|.||||||.|...||..:..:||:|...||....:..|...|||:|.:||:
plant   869 DVVILRFMIEACWAPMLAAFSVPLDQSDDLIVINICLEGFHHAIHATSLMSMKTHRDAFVTSLAK 933

  Fly   892 FTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGVRPQ--F 954
            ||.|  :||. ::|.:||:.||.::.:|..:||||..:|..|:.|:|:.|...|:|.|..|.  |
plant   934 FTSL--HSPA-DIKQRNIEAIKAILRLADEEGNYLQDAWEHILTCVSRFEQLHLLGEGAPPDATF 995

  Fly   955 LSGAQTTLKDSLNPSVKEHI-----------------------------GETSSQSV-------- 982
            .:..|...:.|..|  |::|                             |...|::|        
plant   996 FASKQNESEKSKQP--KQYILPVLKRKGPGKSQYAATGVLRGSYDSMSLGGKGSKNVRQEQMSSI 1058

  Fly   983 ---------VVAVDRIFTGSMRLDGDAIVDFVKALCQVSVDELQQ-QQPRMFSLQKIVEISYYNM 1037
                     |..::::|:.|.:|:.:||:|||||||:||:|||:. ..||:|||.|||||::|||
plant  1059 VSNLNLLEQVGEMNQVFSQSQKLNSEAIIDFVKALCKVSMDELRSPSNPRVFSLTKIVEIAHYNM 1123

  Fly  1038 ERIRLQWSRIWQVLGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPFEH 1102
            .||||.||.|||||...|..:||:.|..|:.||:||||||||||:|:.|.:|:.||.:|:.||..
plant  1124 NRIRLVWSSIWQVLSGFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMTPFVI 1188

  Fly  1103 IMKKNASPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNEEPIVELAFQTTGKIIGD 1167
            :|:::....||::::||::|||.|:.:|::||||::|.:|..||.|:.:.||.|:|:...|||.:
plant  1189 VMRRSNDVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVFLSFEIIEKIIRE 1253

  Fly  1168 LYKRQFAIMVDSFQDAVKCLSEFATARF-PDTSMEAIRLVRTCAQCVHEA--------------- 1216
            .:.........:|.|.|.||..|...|| .|.|:.:|..:|.||..:.|.               
plant  1254 YFPYITETETTTFTDCVNCLVAFTNNRFSKDISLSSIAFLRYCATKLAEGDLNSPSTNKYKGTSG 1318

  Fly  1217 --PQ--LFAEHAGMENDASVAEEDRVWVRGWFPMLFSLSCVVNRCKLDVRTRALTVLFEIVKTYG 1277
              ||  |.:..:|.:.:..:...:.::.  |||:|..||.:....:.::|..||.::|:.::.:|
plant  1319 KIPQSSLHSGKSGKQENGEIVNNNHLYF--WFPLLSGLSELSFDPRPEIRKSALQIMFDTLRNHG 1381

  Fly  1278 ESFK-PHWWKDLFNVIFRIFDNMKL---PEHVTEKSE---------------WMTTTCNHALYAI 1323
            ..|. |.|.|...:|:|.|||.::.   |....|.::               |:..||..||..:
plant  1382 HLFSLPLWEKVFESVLFPIFDYVRHSIDPSGEDESADQGSSGGEVDELDHDAWLYETCTLALQLV 1446

  Fly  1324 IDVFTQYFDVLGHLLLEELFAQLHWCVQQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCI 1388
            :|:|.:::..: :.|||::...|...:::.::.||..|......|:......|:|..|.:....:
plant  1447 VDLFVKFYTTV-NPLLEKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSDADGLFSEEKWLEVVSAL 1510

  Fly  1389 LDIFNATLP--QDLLSWRPKAHSSNNIPQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSRKED 1451
            .:....|.|  ...||....|.|..:         ||:|:.........|        ||...|:
plant  1511 KEAAKTTCPDFSYFLSEEYVARSQRS---------ALNIQNSNAESAAPT--------ATDGNEE 1558

  Fly  1452 AETLA---QAAADLTGGRSGSQSQLLECQREEQGMY-GYLRTRQLLTLADCLMQSHRFAKRFNAD 1512
            ::..|   .||......|:..|..|::...|...|| ..|..:..|.|.|.|......|...|::
plant  1559 SQRTATHLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPQLSAKNTLVLVDALHGVALHAHGINSN 1623

  Fly  1513 HDQRSLLWRAGFKGSVK-PNLLKQETSSLACVLRIFFKMYGDENRR---SDWPGIEQELVQVCKE 1573
            ...||.|...|....:: |.||:.|..|....|.....:..|:.::   .:...||..||.:|:|
plant  1624 TILRSRLQELGPMTQMQDPPLLRLENESYQICLTFLQNLVADKTKKEEEEEEEEIESLLVNICQE 1688

  Fly  1574 ALGYYL-------SLQSEAHR------------------DAWTSLLLLILTRLLKMSDARFATHV 1613
            .|.:|:       .||||:.|                  .|...|::..|..:..:.:|.|..::
plant  1689 VLNFYIETSSSAKKLQSESSRASEYRWRIPLGSGKRRELSARAPLIVATLQAMCTLDEASFEKNL 1753

  Fly  1614 SNYYSLLCEMM-CFDLKPELRSVLRRVF-MRIGPV 1646
            ...:.||..:: |.....|:::.|..:. :.:|||
plant  1754 KCLFPLLANLISCEHGSNEVQTALADMLGLSVGPV 1788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 581/1767 (33%)
DCB 30..212 CDD:292830 69/191 (36%)
Sec7_N 312..465 CDD:289549 72/154 (47%)
Sec7 582..767 CDD:279680 101/184 (55%)
DUF1981 1080..1161 CDD:286414 33/80 (41%)
AT3G60860NP_191645.1 PLN03076 1..1793 CDD:215560 599/1855 (32%)
DCB 6..217 CDD:292830 77/210 (37%)
Sec7_N 345..499 CDD:289549 73/155 (47%)
Sec7 617..799 CDD:279680 101/184 (55%)
DUF1981 1166..1249 CDD:286414 33/82 (40%)
Mon2_C 1346..>1421 CDD:292823 22/76 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 209 1.000 Domainoid score I803
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4687
Inparanoid 1 1.050 857 1.000 Inparanoid score I63
OMA 1 1.010 - - QHG54931
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 1 1.000 - - FOG0001583
OrthoInspector 1 1.000 - - otm2530
orthoMCL 1 0.900 - - OOG6_100729
Panther 1 1.100 - - O PTHR10663
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X714
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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