DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and iqsec2b

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_005167294.1 Gene:iqsec2b / 797187 ZFINID:ZDB-GENE-081105-73 Length:1581 Species:Danio rerio


Alignment Length:633 Identity:147/633 - (23%)
Similarity:266/633 - (42%) Gaps:165/633 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 PVPP--MQVQSPTSTEQDQADTTI---QTMH--SGSSHSLNSNQEQLQDLPEALEERKMR----- 582
            |:||  ::.|..:..:.|..::|.   :|::  |||| |.:|.:|.|..|.:...:|:.|     
Zfish   614 PLPPGGLEQQCCSDGDNDSLNSTTNSNETINCSSGSS-SRDSLREPLPPLGKQTYQRESRHNWDS 677

  Fly   583 ----KEVME-----TGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGE 638
                .:|::     .|:.|||:||:||:|:|.||..:..|...|||::.|.:.|.:.:||.::|.
Zfish   678 PAFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIEKGFVSDTPVGIARFILERKGLSRQMIGEFLGN 742

  Fly   639 ND-DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPK-NQL 701
            .. ..:|:|:...:|..||..|::..|||......::.|||||::||:|.|:.|||.|||. .:.
Zfish   743 RQKQFNKDVLDCVVDEMDFSGMDLDDALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPALVRQ 807

  Fly   702 FQSADTVYVLAFSIIMLTTDLHSPQVK--HKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISE 764
            ||:.||:::|||:||:|.||::||.:|  .||..:.:||..||: |:..::|.:.|..||..|.:
Zfish   808 FQNPDTIFILAFAIILLNTDMYSPNIKAERKMKLDDFIKNLRGV-DNGQEIPRDLLVGIYQRIQK 871

  Fly   765 HEIKMKNNSGMLQQAKP---TGKQAFITEKRRKLLWNMEMEVIS--------------------- 805
            .|::..::.....||..   .||:..::...|:|:...::..:.                     
Zfish   872 WELRTNDDHVSQVQAVERVIVGKKPVLSLPHRRLVCCCQLHEVPDPNRPQRSGVHQREVFLFNDL 936

  Fly   806 LTATNLMQ----SVSH-VKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDG 865
            |..|.:.|    ||:: .:..|...:...|   ||:.::.|                      .|
Zfish   937 LVVTKIFQKKKTSVTYSFRQSFPLVEMQVH---MFQNSYYP----------------------HG 976

  Fly   866 IRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSW 930
            :|..              :.:....|..|:...:|..:.:.:.:..::..|........|...|.
Zfish   977 VRLT--------------SAIPGGERKVLIVFTAPSQQDRTRFVSDLRESIAEVQEMEKYRVESE 1027

  Fly   931 LDIVKCISQLEL------AQLIGTGVRPQFLSG--AQTTLKDSLNPSVKEHIGETSSQSVVVAVD 987
            |:..|.:.:..|      |..:| ||:.:.::|  .:.:|.|:.:|      ||...::.:.:..
Zfish  1028 LEKQKGVMRPSLLTNSIMAGGVG-GVKNEVVNGTMGRPSLDDNYSP------GEGLKRTALSSSL 1085

  Fly   988 RIFTGSMRLDGDAIVDFVKALCQVSVDELQQQ-----------QPRMF----------------- 1024
            |..:.|.:......|..:.:..:||:.|.:|.           .|||.                 
Zfish  1086 RDLSESGKRGRRNSVGSLDSTMEVSLSEAEQSTASPALPSSHCSPRMLWDRRLPASPPHPEPRSG 1150

  Fly  1025 ------------------SLQKIVEISYYNMERIRLQWSRIWQVLGEH 1054
                              |||:         .|.|..|:..|:...:|
Zfish  1151 GGGWAGAATHTCSDWRWASLQQ---------HRERNDWNGDWEQQQQH 1189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 147/633 (23%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 74/202 (37%)
DUF1981 1080..1161 CDD:286414
iqsec2bXP_005167294.1 Sec7 686..871 CDD:279680 72/185 (39%)
IQ_SEC7_PH 899..1026 CDD:293062 19/165 (12%)
PH 926..1014 CDD:278594 15/126 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582831
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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