DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Psd2

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_036017188.1 Gene:Psd2 / 74002 MGIID:1921252 Length:771 Species:Mus musculus


Alignment Length:401 Identity:100/401 - (24%)
Similarity:167/401 - (41%) Gaps:93/401 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 EQDQADTTIQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKP-QKGVQFLQE 606
            ::|..||. :.::|.|..||   ::.|.|....|...:        |:|..:..| ..|.|.:.|
Mouse   257 DEDDEDTD-KLLNSASDTSL---KDGLSDSDSELSSSE--------GLEPGSTDPLANGCQGVSE 309

  Fly   607 KQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEG 671
                  ....:||.|:..|...:..:...:|:|::.|:.|...|:..|||..:.:..|||..|:.
Mouse   310 ------AARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKA 368

  Fly   672 FRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHS-PQVKHKMTKEQ 735
            |.|.||.|:.:|::..|:.|||:|||.:.  .|.|.::.|..::::|.||||. ..:..||:.:|
Mouse   369 FPLMGETQERERVLTHFSRRYCQCNPDDS--TSEDGIHTLTCALMLLNTDLHGHVNIGKKMSCQQ 431

  Fly   736 YI----KMNRGISDSKSDLPEEYLSSIYDE-----ISEHEIKMKNNSGMLQQAKPTGKQAFITEK 791
            :|    ::|.| .|...||.:...:||.:|     |.|.|:: |:.|.::.....||     |:|
Mouse   432 FIANLDQLNDG-QDFAKDLLKTLYNSIKNEKLEWAIDEDELR-KSLSELVDDKFGTG-----TKK 489

  Fly   792 RRKLL--WNMEMEV-ISLTATNLMQSVSHVKSPFTSAKHLE---HVRPMFKMAWTPFLAAFSVGL 850
            ..::|  .|..::| .:|.||.....|      .|...|.:   ...|..:..|..|.|...   
Mouse   490 VTRILDGGNPFLDVPQALNATTYKHGV------LTRKTHADMDGKRTPRGRRGWKKFYAVLK--- 545

  Fly   851 QDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAY--VQALARFTLLNA--------------NS 899
                    .|:                :.|::|.|  .:||:...|.||              :.
Mouse   546 --------GTI----------------LYLQKDEYRLDKALSEGDLKNAIRVHHALATRASDYSK 586

  Fly   900 PINEMKAKNID 910
            ..|.:|.|..|
Mouse   587 KSNVLKLKTAD 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 100/401 (25%)
Psd2XP_036017188.1 Sec7 294..462 CDD:238100 53/176 (30%)
PH_EFA6 508..631 CDD:270107 22/123 (18%)

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