DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Cyth4

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_082471.2 Gene:Cyth4 / 72318 MGIID:2441702 Length:393 Species:Mus musculus


Alignment Length:252 Identity:101/252 - (40%)
Similarity:150/252 - (59%) Gaps:25/252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   545 DQADTTIQTMHSGSSHSLNS----NQEQLQDLP----------------EALEERKM--RKEVME 587
            |...|....:.||.:..|..    .::.|:|:.                |:.||.:|  :::.|.
Mouse     2 DVCHTDPAELSSGEAKELQQIKWHRKQLLEDIQKLKDEIADVFAQIDCFESTEESRMAQKEKEMC 66

  Fly   588 TGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYID 652
            .|.:.||..|.||:|:|.|.:||.:...|||::|::.:.|:||.||.|:||.|..:.:|:.|::|
Mouse    67 IGRKKFNMDPNKGIQYLIEHKLLTSDVQDIAQFLYKGDGLNKTAIGTYLGEKDPINLQVLQAFVD 131

  Fly   653 AFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIM 717
            ..:|..:.:|.|||..|..||||||||||||:||.||:|||.|||  .:|:|.||.|||:||:||
Mouse   132 CHEFANLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAARYCLCNP--GVFRSTDTCYVLSFSVIM 194

  Fly   718 LTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSG 774
            |.|.||:|.|:.:...|:::.||||| :|.||||||.|.:::|.|......:..:.|
Mouse   195 LNTGLHNPNVRDRPPFERFVTMNRGI-NSGSDLPEEQLRNLFDSIKSEPFSIPEDDG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 101/252 (40%)
Cyth4NP_082471.2 Sec7 61..243 CDD:460178 89/184 (48%)
PH_GRP1-like 258..376 CDD:269954
C-terminal autoinhibitory region. /evidence=ECO:0000250 386..393
Blue background indicates that the domain is not in the aligned region.

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