DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and Iqsec1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_038964676.1 Gene:Iqsec1 / 686590 RGDID:1596313 Length:1203 Species:Rattus norvegicus


Alignment Length:934 Identity:206/934 - (22%)
Similarity:341/934 - (36%) Gaps:301/934 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IVRALEKILADKDIRRSHHSQLKK-----SCDSA--LEQIKAELISAGQIAEGNELPCAALP--L 68
            ||.|.:::||.   ||....:|::     |.::|  ||:.:..|.:..:..:....|..|:|  .
  Rat    21 IVAAQQELLAQ---RRRRIEELERQVARLSRENAGLLERHRRHLAACARRPDPGPSPLGAIPELS 82

  Fly    69 PKNDAASIINAETYFLPFELACKSRSPRIVV----------TALDCLQKLIAY--GHLT-GSIQD 120
            .:.|.:...::.:.....|......:.|..|          |:||...   ||  |.|. ||   
  Rat    83 SRRDKSEEESSRSIRSSLETGSSLSTDRYSVEGEAPSSETGTSLDSPS---AYHQGPLVPGS--- 141

  Fly   121 SANPGHLLIDRIVVTIYGCFSGPQTDEAVQLQIIKALLTVVTSQ--------------------- 164
            |.:|.|  .:...|..||.::||...:..:...::...:|:..|                     
  Rat   142 SLSPDH--YEHTSVGAYGLYAGPGPQQRTRRPRLQHSTSVLRKQAEEEAIKRSRSLSESYELSSD 204

  Fly   165 ----HVEIHEFT---------LLQAVRTCYDIYLSSKNLVNQTTARATLTQMLNVIFARMENQV- 215
                .||:.|..         ..:.::|.:..|..:||.....::.:.......::.:.|..|. 
  Rat   205 LQDKQVEMLERKYGGRLVTRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFS 269

  Fly   216 YELPP--------------PNSNPTNGSIHSEDCNGSGEESLR----DSDEVIA-SEL------- 254
            :|.|.              .|.....|::...:|....:.:|:    .||...| :||       
  Rat   270 FEGPEKVHSSYFEGKQVSVTNDGSQLGALVPSECGDLSDPALKSPAPSSDFADAITELEDAFSRQ 334

  Fly   255 ---LAEIISAAYNEAMKDQESV----------GEPEPTLNGNDY-------SSHSDHDSVELHSE 299
               |||.|..|.|......|.|          .||:|.|:|.|:       :|:||   |.|:.:
  Rat   335 VKSLAESIDDALNCRSLHSEEVPASDTARARDTEPKPGLHGMDHRKLDEMTASYSD---VTLYID 396

  Fly   300 NDAVVTAKFTHILQKDAFLVFRALCKLSMKPLP----DGHPDPKSHELRSKVLSLHLLLLILQNA 360
            .:                       :|| .|||    ...|.....:||            |::.
  Rat   397 EE-----------------------ELS-PPLPLSQAGDRPSSTESDLR------------LRSG 425

  Fly   361 GPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFL 425
            |   .:.:.:.:|.|:  ..|.::......|.:......:.|.       ||.          .|
  Rat   426 G---AAQDYWALAHKE--DKADTDTSCRSTPSLERPEPRLRVE-------HLP----------LL 468

  Fly   426 NILEANSSSFEHKWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKI-AQGRQAL 489
            .|...:.||.|                                  |.:|  :|.|.: .|.....
  Rat   469 TIEPPSDSSVE----------------------------------LSDR--SDRSSLKRQSAYER 497

  Fly   490 ELGAN----------------PMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQS 538
            .||..                |.:|..:|                           |.||..::|
  Rat   498 SLGGQQGSPKHGPHGGPPKGLPREEPELR---------------------------PRPPRPLES 535

  Fly   539 ----------PTSTEQDQADTTIQTMHSGS-----------SHSLNSNQEQL------------- 569
                      .:.:|.|.:|....:::|.|           |.|.:|.:||.             
  Rat   536 HLAINGSANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNS 600

  Fly   570 QDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGN 634
            .|.| |.....:||.....|:.|||:||:||:|:|.|:..:..|...:|.:|.:.:.|.:.:||.
  Rat   601 WDSP-AFSNDVIRKRHYRIGLNLFNKKPEKGIQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGE 664

  Fly   635 YIGEND-DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNP- 697
            ::|... ..:::|:...:|..||..||:..|||......|:.|||||::||:|.|:.|||.||| 
  Rat   665 FLGNRQKQFNRDVLDCVVDEMDFSAMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCVCNPG 729

  Fly   698 KNQLFQSADTVYVLAFSIIMLTTDLHSPQVK--HKMTKEQYIKMNRGISDSKSDLPEEYLSSIYD 760
            ..:.|::.||:::|||:||:|.||::||.||  .||..|.::|..||:.|.: |:|.|.|..||:
  Rat   730 VVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGE-DIPRETLIGIYE 793

  Fly   761 EISEHEIKMKNNSGMLQQAKPTGK 784
            .|.:.|  :|.|...:.|.:...|
  Rat   794 RIRKRE--LKTNEDHVSQVQKVEK 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 206/934 (22%)
DCB 30..212 CDD:292830 39/237 (16%)
Sec7_N 312..465 CDD:289549 22/156 (14%)
Sec7 582..767 CDD:279680 74/188 (39%)
DUF1981 1080..1161 CDD:286414
Iqsec1XP_038964676.1 Sec7 612..800 CDD:396096 75/190 (39%)
IQ_SEC7_PH 832..967 CDD:406773
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342757
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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