DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and cyth2

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_005157903.1 Gene:cyth2 / 569358 ZFINID:ZDB-GENE-100921-55 Length:416 Species:Danio rerio


Alignment Length:223 Identity:105/223 - (47%)
Similarity:141/223 - (63%) Gaps:19/223 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 QLQDLPEALEERKMRKEVMET----------------GIELFNRKPQKGVQFLQEKQLLGATCGD 616
            ::|.|.|.|.|..:..|.:||                |.:.||..|:||:.||.|.:||..|..|
Zfish    48 EIQRLKEELREAIIEVEGLETSTEGSKTLQKSRHVAMGRKKFNMDPKKGIVFLVENELLRHTPED 112

  Fly   617 IARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKI 681
            ||::|::.|.|:||.||:|:||.||.:.:|:.|::|..:|..:.:|.|||..|..||||||||||
Zfish   113 IAQFLYKGEGLNKTAIGDYLGERDDFNIKVLQAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKI 177

  Fly   682 DRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDS 746
            ||:||.||.|||.|||  .:|||.||.|||:|:||||.|.||:|.|:.|.|.|::|.|||||:|.
Zfish   178 DRMMEAFAQRYCHCNP--GVFQSTDTCYVLSFAIIMLNTSLHNPNVRDKPTVERFISMNRGINDG 240

  Fly   747 KSDLPEEYLSSIYDEISEHEIKMKNNSG 774
             .|||||.|.::||.|.....|:..:.|
Zfish   241 -GDLPEELLRNLYDSIKNEPFKIPEDDG 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 105/223 (47%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 98/200 (49%)
DUF1981 1080..1161 CDD:286414
cyth2XP_005157903.1 Sec7 78..260 CDD:279680 95/184 (52%)
PH_GRP1-like 275..394 CDD:269954
PH 279..392 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582791
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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