DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and psd3l

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_021334922.1 Gene:psd3l / 559329 ZFINID:ZDB-GENE-030131-8195 Length:1135 Species:Danio rerio


Alignment Length:1106 Identity:221/1106 - (19%)
Similarity:354/1106 - (32%) Gaps:389/1106 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LEKILADKDIRRSHHSQLKKSCDSALEQIKAELISAGQIAEGNE------------LPCAALPLP 69
            |:..|.|.||   ..:.|.:..|..|..:.:.|.:..|.|...:            :||      
Zfish   225 LDSTLDDDDI---DETSLFQEIDRELSNLLSGLTARSQHAATEQGSLSGDATASPMIPC------ 280

  Fly    70 KNDAASIINAETYFLPFELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSANPGHLLID---- 130
                    |.:...||.:|...::       .|| ||.  ....|||   ||.....||.|    
Zfish   281 --------NGQNQTLPSQLEMANQ-------GLD-LQN--GQSELTG---DSLLTSGLLFDSWCE 324

  Fly   131 ---------RIVVTIYGCFSGPQTDEAVQLQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLS 186
                     ........|||.....:.:......|...|..|..|                  ||
Zfish   325 ALIKDPSSVMAAANELSCFSTGNAPDKLDASPTPAGAHVEPSGEV------------------LS 371

  Fly   187 SKNLVNQTTARAT--------------------------LTQMLNVIFARMENQVYELPPPN--- 222
            .:|...:|..:.|                          |.::..:....:|.......||.   
Zfish   372 QENSGKETEGKRTGSPSPIRTDEPSAEIVDESLEESNKILAEVPGIFSGFLEGGKLRDKPPKKLR 436

  Fly   223 --SNPTNGSIHSEDCNGSGEESLRDSDEVIASELLAEIISAAYNEAMKDQESVGEPE--PTLNGN 283
              .:.....::.|..|||.:..      .:..|:..:|.|.|  .|...|.||..||  ||.||.
Zfish   437 FVESRAESLVNGEMQNGSHQSC------SVKEEVTQDIQSTA--AAGVPQGSVLRPEQKPTENGT 493

  Fly   284 DYSSHSDHDSVELHSENDAVVTAKFTHILQKDAF--LVFRALCKLSMKPLPDGHPDPKSHELRSK 346
            |..|.....:.|:.:.:  |.:.:|.:||:.:..  .::.::..|.....|...|.|:|....|.
Zfish   494 DRCSAGKSAAGEIDTTD--VFSCQFENILESERLRGTLYSSMDSLDALSNPVPEPTPQSTLEPSF 556

  Fly   347 VLSLHLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVH 411
            ...:.|..:|.|.                      |.:..:.|.|...:||....|..:::.|..
Zfish   557 AFDIPLTPMIQQR----------------------LKDRSLFLEPAAPDLSSDTEVLSVTSTKER 599

  Fly   412 LKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLV 476
            .|..:||             :|||         |:..|.|:           |...|..|.||  
Zfish   600 GKTALEV-------------TSSF---------LSAGCKDS-----------CAALANGLNER-- 629

  Fly   477 NDLSKIAQGRQALELGANPMQEKSMRIRGLECLVS---ILKCMVEWSKDLYVNPNMPVPPMQVQS 538
             |.....||                      ||.|   :...:.:|..|:.|          |:.
Zfish   630 -DPKDWLQG----------------------CLSSDAGLKDVLSDWDSDMDV----------VEC 661

  Fly   539 PTSTEQDQADTTIQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQF 603
            ...|:         .:|:||    .|:||..:.|                               
Zfish   662 LKDTD---------VLHNGS----RSDQEAARRL------------------------------- 682

  Fly   604 LQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFL 668
                          ||.|:..|...::.:..::|:|:|.||.|...|:..|:|....:..:||..
Zfish   683 --------------ARRLYHLEGFRRSDVAKHLGKNNDFSKMVAEEYLTFFEFTDQTLDQSLRCF 733

  Fly   669 LEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTK 733
            |:.|.|.||.|:.:|::..|::||.:|||  .:..:.|.|:.|..::::|.||||.|.:..|||.
Zfish   734 LKAFSLMGETQERERVLIHFSNRYYQCNP--TIITAQDGVHCLTCALMLLNTDLHGPNIGKKMTC 796

  Fly   734 EQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWN 798
            :::|....|::..: |.|.|.|.|:|:.|                            |..||.|.
Zfish   797 QEFINNLDGLNGGQ-DFPRELLKSLYNSI----------------------------KNEKLEWA 832

  Fly   799 MEMEVISLTATNL--------MQSVSHVKS---PFTSAKHLEHV--------------------R 832
            ::.:.:..:.:.|        .:|:|.:.|   ||....|..:.                    .
Zfish   833 VDGDELKKSLSELADKNHHSHSKSISRISSGSNPFLDIAHDPNAAVYKTGFLARKIHADMDGKKT 897

  Fly   833 PMFKMAWTPFLAAFSVGL-----QDCDDPEIATLCLDGIRCAIRI---ACIFHMSLERDAYVQAL 889
            |..|..|..|.|... |:     :|...||.| |..|.::.||.:   ..|..|..|:...|..|
Zfish   898 PRGKRGWKTFYAVLK-GMILYLQKDEYKPEKA-LSEDDLKNAISVHHALAIKAMDYEKKPNVLKL 960

  Fly   890 A----RFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGV 950
            .    |..|..|.|| .||:                       ||:.|:..::.:..|       
Zfish   961 KTADWRVFLFQAQSP-EEME-----------------------SWIRIINSVAAMFSA------- 994

  Fly   951 RPQFLS--GAQ----------TTLKDSLNPSVKEHIGETSSQSVVVAVDRIFTGSMRLDGDAIVD 1003
             |.|.:  |:|          ||.:.|....:|.|..:....|..:|..|.:....::....|.:
Zfish   995 -PSFPAAIGSQKKFSRPLLPATTTRMSQEEQLKSHEAKLKHVSTELAEHRSYPPDKKVKAKEIDE 1058

  Fly  1004 F 1004
            :
Zfish  1059 Y 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 221/1106 (20%)
DCB 30..212 CDD:292830 37/232 (16%)
Sec7_N 312..465 CDD:289549 26/154 (17%)
Sec7 582..767 CDD:279680 49/184 (27%)
DUF1981 1080..1161 CDD:286414
psd3lXP_021334922.1 Sec7 675..829 CDD:238100 53/229 (23%)
PH_EFA6 873..998 CDD:270107 31/158 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582788
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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