DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and psd2

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_021336783.1 Gene:psd2 / 557199 ZFINID:ZDB-GENE-030131-3033 Length:838 Species:Danio rerio


Alignment Length:1061 Identity:202/1061 - (19%)
Similarity:355/1061 - (33%) Gaps:369/1061 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 ENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIASELLAEIISAAYNEAMKDQESVGEP 276
            |.|...|..|...|.....|.|:|||:..|:....|.           ....|...:::|...|.
Zfish     4 EGQDDPLHTPAETPEGQEEHLENCNGTETETEEPDDG-----------DTENNRNTEEEEEEEEE 57

  Fly   277 EPTLNGND-YSSHSDHDSVELHSENDAVVTAKFTHILQKDAFLVFRALCKLSMKPLPDGHPDPKS 340
            :.||:.:| .:...:...::..:||..:.....|...:||:.:   .:|.|..:   :|..|...
Zfish    58 KVTLDQDDGRNGEIESSCLDPGTENGDICEGGDTQRAEKDSSV---TICSLRFE---NGTEDDSE 116

  Fly   341 HELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSIFVALL 405
            .:...:|:.                                 ....:......||||:....|.:
Zfish   117 EQDDEEVIP---------------------------------HEGNLDAFSSTFELSVEEADAEV 148

  Fly   406 SNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICA--------DAQSVVDIYVNY 462
            .:.:   :.:.|...::.|       ||:||   .:::.:.:...        :.:...|.....
Zfish   149 EDEE---REETETRNQDSF-------SSTFE---SIVERVAKATVVEEEEEEEEGEEEFDRTKES 200

  Fly   463 DCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKSMRIRGLECLVS-----ILKCMVEWSKD 522
            ...||:.  |||:|                      :|..:||..|..|     :|....|  .|
Zfish   201 QDGFSST--FERIV----------------------ESELLRGGTCYSSLDSLDVLSLTDE--TD 239

  Fly   523 LYVNPNMPVPPMQVQSP-------------------------TSTEQDQAD------TTIQ---- 552
            ..|:...|:.|:..|..                         |.|.:|:|.      |||.    
Zfish   240 SCVSFEAPLTPLIQQRALMGPEPPELELETVQEGAEGEGEFGTETARDEASSASPLRTTIPGSRS 304

  Fly   553 ----------TMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQEK 607
                      ::.:|....|..|.:....:|.::.:..:...:.::..||      ..|..|:. 
Zfish   305 ENVLSQPAQWSIPNGFHIELPGNGQSAGMMPNSISDANLTDVLCDSDSEL------GSVDTLER- 362

  Fly   608 QLLGAT------C---GDIAR-------WLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDF 656
               |:|      |   .|.|:       :|...:|.|   :..::|:|::.|:.|...|:..|||
Zfish   363 ---GSTDTLANGCRVDADAAKRLAKRLFYLEGFKRCD---VARHLGKNNEFSQLVASEYLSFFDF 421

  Fly   657 RQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTD 721
            ..:.:..|||..|:.|.|.||.|:.:|::..|:.|:|.|||  :...|.|..:.|..::::|.||
Zfish   422 TGLSLDRALRNFLKAFPLMGETQERERVLVHFSKRFCHCNP--ETLTSEDGAHTLTCALMLLNTD 484

  Fly   722 LHS-PQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQ 785
            ||. ..:..||:.:|:|....|:.|.| |.|:|.|..:|:.|                       
Zfish   485 LHGHVNIGKKMSCQQFISNLDGLDDGK-DFPKELLKVLYNSI----------------------- 525

  Fly   786 AFITEKRRKLLWNMEMEVISLTATNLMQS-----------VSHVKSPF---------TSAKHLEH 830
                 |..||.|.:|.|.:..:.:.|::.           |:...:||         |:.||...
Zfish   526 -----KNEKLEWAIEEEELRKSLSELVEEQCEAGGKRVVRVTDGSNPFIGIPLLLNATTYKHGVL 585

  Fly   831 VR-----------PMFKMAWTPFLAAFS---VGLQ------DCDDPEIATLCLDGIRCAIRIACI 875
            .|           |..:..|..|.|...   :.||      |.|..|:      .::.|:|:   
Zfish   586 TRKSHADMDGKRTPRGRRGWKKFYAVLKGMILYLQKDEYKPDKDLSEV------DLKNAVRV--- 641

  Fly   876 FHMSLERDAYVQALARFTLLNANSPINEMKAKNIDTIKT-----LIMVAHTDGNYLGSSWLDIVK 935
             |.:|                |....:..|.:|:..:||     .::.|.::...:  ||:..:.
Zfish   642 -HHAL----------------ATRACDYSKRQNVLKLKTSDWRVFLLQAPSEEEMM--SWIFRIN 687

  Fly   936 CISQLELAQLIGTGV-------RPQFLSGAQTTLKDSLNPSVKEHIGETSSQSVVVAVDRIFTGS 993
            .::.|..|......:       || .|..:.|.|..  ...:|.|..:                 
Zfish   688 LVAALFSAPAFPAAIGSMKKFCRP-LLPSSTTRLNQ--EEQLKSHENK----------------- 732

  Fly   994 MRLDGDAIVDFVKALCQVSV--DELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQVLGEHFN 1056
                          |.||||  :|.::..|.:....|       ..|..|::         ||: 
Zfish   733 --------------LKQVSVELEEHKRSPPELTPKSK-------ESEEYRIK---------EHY- 766

  Fly  1057 AVGCNSNEEISFFALDSLRQLSMKF----MEKGEFSNFRFQ-KDFLRPFEHIMKKNASPAIRDMV 1116
                .:.|:..:....||.|..::.    ::|.|.|.|..: |:     .|:.|..:||:|..  
Zfish   767 ----LTYEKCRYETYISLLQAKIRAGSDDLDKIEASLFSGEAKE-----GHLRKTQSSPSISQ-- 820

  Fly  1117 VRCIAQMVNSQA-------HN 1130
                .|.||.:|       ||
Zfish   821 ----GQGVNGRAAHKHIPEHN 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 202/1061 (19%)
DCB 30..212 CDD:292830 202/1061 (19%)
Sec7_N 312..465 CDD:289549 19/160 (12%)
Sec7 582..767 CDD:279680 57/201 (28%)
DUF1981 1080..1161 CDD:286414 16/63 (25%)
psd2XP_021336783.1 Sec7 361..530 CDD:238100 54/206 (26%)
PH_EFA6 576..699 CDD:270107 27/150 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582826
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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