DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and iqsec3b

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_682922.4 Gene:iqsec3b / 555340 ZFINID:ZDB-GENE-050420-210 Length:1051 Species:Danio rerio


Alignment Length:517 Identity:130/517 - (25%)
Similarity:226/517 - (43%) Gaps:126/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 NPNMPVPPMQVQSPTSTE-QDQADTTIQTMHSG-------------------------SSHSLNS 564
            :|..|.||     |:..| ::|....:.|:.:|                         ||.|.::
Zfish   443 DPEFPPPP-----PSEEEKENQQPIGLDTVTTGAGLEGKQTNQVAPEIAENSSDPISSSSTSTSA 502

  Fly   565 NQEQLQDLPE---------ALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARW 620
            .:..:..||.         .|.....||.:...|:.|||..|.||:|||..:..:..|...:|.:
Zfish   503 CETMILSLPRPHCQNTPCGTLSTDIARKRLYRIGLNLFNVNPDKGIQFLISRGFIPDTAIGVAHF 567

  Fly   621 LHEDERLDKTVIGNYIGEND-DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRL 684
            |.:.:.|.:.:||.::|.:. ..:::|:...:|..||..:|:..|||......|:.|||||::||
Zfish   568 LLQRKGLSRQMIGEFLGNSKRQFNRDVLDCVVDEMDFSMLELDEALRKFQAHVRVQGEAQKVERL 632

  Fly   685 MEKFASRYCECNPK-NQLFQSADTVYVLAFSIIMLTTDLHSPQVK--HKMTKEQYIKMNRGISDS 746
            :|.|:.|||.|||. .|.|.:.||:::|||:|::|.||::||.:|  .||..|.:|:..||:.|.
Zfish   633 IEAFSQRYCMCNPDVVQQFHNPDTIFILAFAIVLLNTDMYSPNIKPERKMLLEDFIRNLRGVDDG 697

  Fly   747 KSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNMEMEVI------S 805
             :|:|.|.|:.||:.|.:.|::...:           ...::|...:.:|   .|:.|      .
Zfish   698 -ADIPREMLAGIYERIQQRELRSNED-----------HVTYVTRVEQSIL---GMKTILSVPHRR 747

  Fly   806 LTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFS---VGLQDCDDPEIA---TLC-- 862
            |...:.:..|:.|..|...|.|...|          ||  |:   |.|:.|...:.|   |.|  
Zfish   748 LVCCSRLYEVTDVNKPQKQASHQREV----------FL--FNDLIVILKLCPKKKTAATYTFCKA 800

  Fly   863 --LDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNY 925
              |.|::        ||: .|.:.|...:   |:|   ||.:..|.:.:              ::
Zfish   801 MGLLGMQ--------FHL-FENEYYPHGI---TIL---SPFSSEKKQVV--------------SF 836

  Fly   926 LGSSWLDIVKCISQL-----ELAQLIGTGVRPQFLSGAQTTLKDSLNPSVKE---HIGETSS 979
            ...|..:::|.|..|     |:|::  ..:|.::....|..:::..|.:..:   |.|.:|:
Zfish   837 CSQSADELLKFIEDLRESIAEVAEM--EQIRIEWELERQQVVRNQTNKNGTQLDIHAGPSSA 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 130/517 (25%)
iqsec3bXP_682922.4 Sec7 529..717 CDD:460178 71/188 (38%)
IQ_SEC7_PH 739..867 CDD:465120 35/170 (21%)

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