DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and iqsec3b

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_682922.4 Gene:iqsec3b / 555340 ZFINID:ZDB-GENE-050420-210 Length:1051 Species:Danio rerio


Alignment Length:517 Identity:130/517 - (25%)
Similarity:226/517 - (43%) Gaps:126/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 NPNMPVPPMQVQSPTSTE-QDQADTTIQTMHSG-------------------------SSHSLNS 564
            :|..|.||     |:..| ::|....:.|:.:|                         ||.|.::
Zfish   443 DPEFPPPP-----PSEEEKENQQPIGLDTVTTGAGLEGKQTNQVAPEIAENSSDPISSSSTSTSA 502

  Fly   565 NQEQLQDLPE---------ALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARW 620
            .:..:..||.         .|.....||.:...|:.|||..|.||:|||..:..:..|...:|.:
Zfish   503 CETMILSLPRPHCQNTPCGTLSTDIARKRLYRIGLNLFNVNPDKGIQFLISRGFIPDTAIGVAHF 567

  Fly   621 LHEDERLDKTVIGNYIGEND-DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRL 684
            |.:.:.|.:.:||.::|.:. ..:::|:...:|..||..:|:..|||......|:.|||||::||
Zfish   568 LLQRKGLSRQMIGEFLGNSKRQFNRDVLDCVVDEMDFSMLELDEALRKFQAHVRVQGEAQKVERL 632

  Fly   685 MEKFASRYCECNPK-NQLFQSADTVYVLAFSIIMLTTDLHSPQVK--HKMTKEQYIKMNRGISDS 746
            :|.|:.|||.|||. .|.|.:.||:::|||:|::|.||::||.:|  .||..|.:|:..||:.|.
Zfish   633 IEAFSQRYCMCNPDVVQQFHNPDTIFILAFAIVLLNTDMYSPNIKPERKMLLEDFIRNLRGVDDG 697

  Fly   747 KSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNMEMEVI------S 805
             :|:|.|.|:.||:.|.:.|::...:           ...::|...:.:|   .|:.|      .
Zfish   698 -ADIPREMLAGIYERIQQRELRSNED-----------HVTYVTRVEQSIL---GMKTILSVPHRR 747

  Fly   806 LTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFS---VGLQDCDDPEIA---TLC-- 862
            |...:.:..|:.|..|...|.|...|          ||  |:   |.|:.|...:.|   |.|  
Zfish   748 LVCCSRLYEVTDVNKPQKQASHQREV----------FL--FNDLIVILKLCPKKKTAATYTFCKA 800

  Fly   863 --LDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNY 925
              |.|::        ||: .|.:.|...:   |:|   ||.:..|.:.:              ::
Zfish   801 MGLLGMQ--------FHL-FENEYYPHGI---TIL---SPFSSEKKQVV--------------SF 836

  Fly   926 LGSSWLDIVKCISQL-----ELAQLIGTGVRPQFLSGAQTTLKDSLNPSVKE---HIGETSS 979
            ...|..:::|.|..|     |:|::  ..:|.::....|..:::..|.:..:   |.|.:|:
Zfish   837 CSQSADELLKFIEDLRESIAEVAEM--EQIRIEWELERQQVVRNQTNKNGTQLDIHAGPSSA 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 130/517 (25%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 71/188 (38%)
DUF1981 1080..1161 CDD:286414
iqsec3bXP_682922.4 Sec7 529..717 CDD:279680 71/188 (38%)
IQ_SEC7_PH 742..868 CDD:293062 34/168 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582830
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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