DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Fbxo8

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_056606.2 Gene:Fbxo8 / 50753 MGIID:1354696 Length:319 Species:Mus musculus


Alignment Length:193 Identity:57/193 - (29%)
Similarity:102/193 - (52%) Gaps:11/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   573 PEALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIG 637
            |.....||:..: ::.|...||..|::||.:...|.:|..:..:||:::.....|:...:..|: 
Mouse   127 PLGFSFRKLYMQ-LDEGSLTFNANPEEGVSYFMSKGILDDSPKEIAKFIFCTRTLNWKKLRIYL- 189

  Fly   638 ENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGE-AQKIDRLMEKFASRYCECNP--KN 699
               |..::|:...:...:||...:..|||........|.| .:.::.|:.||:.|:|.|||  ..
Mouse   190 ---DERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSHRFCACNPDLMR 251

  Fly   700 QLFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEI 762
            :|..|.|.||||.:|:|:|:.||.||.||:||:|.::|:..|   .:..::.|:::..:||.|
Mouse   252 ELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTR---RAAQNISEDFVGHLYDNI 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 57/193 (30%)
Fbxo8NP_056606.2 F-box_FBXO8 68..113 CDD:438860
Sec7 133..312 CDD:238100 56/187 (30%)
Blue background indicates that the domain is not in the aligned region.

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