DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Iqsec3

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_997500.1 Gene:Iqsec3 / 404781 RGDID:1593191 Length:1194 Species:Rattus norvegicus


Alignment Length:490 Identity:131/490 - (26%)
Similarity:217/490 - (44%) Gaps:95/490 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 STEQDQADTTIQTMHSGSSHSLNSNQEQLQ----DLPE------------ALEERKMRKEVMETG 589
            |.:...:..:.::..|||..|..:::|.||    .||.            .|....:||.:...|
  Rat   596 SEQLSSSSASTKSAKSGSEVSAAASKEALQAVILSLPRYHCENPASCRSPTLSTDTLRKRLYRIG 660

  Fly   590 IELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGEN-DDHSKEVMCAYIDA 653
            :.|||..|.||:|||..:..:..|...:|.:|.:.:.|.:.:||.::|.: ...:::|:...:|.
  Rat   661 LNLFNINPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFNRDVLDCVVDE 725

  Fly   654 FDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPK-NQLFQSADTVYVLAFSIIM 717
            .||..||:..|||......|:.|||||::||:|.|:.|||.|||: .|.|.:.||:::|||:||:
  Rat   726 MDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEVVQQFHNPDTIFILAFAIIL 790

  Fly   718 LTTDLHSPQVK--HKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAK 780
            |.||::||.:|  .||..|.:|:..||:.|. :|:|.|.:..||:.|.:.|:| .|...:....|
  Rat   791 LNTDMYSPNIKPDRKMMLEDFIRNLRGVDDG-ADIPRELVVGIYERIQQKELK-SNEDHVTYVTK 853

  Fly   781 P----TGKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTP 841
            .    .|.:..::...|:|:....:  ..:|..|.:|            |...|.|.:|      
  Rat   854 VEKSIVGMKTVLSMPHRRLVCCSRL--FEVTDVNKLQ------------KQAAHQREVF------ 898

  Fly   842 FLAAFSVGLQDCDDPEIA---TLC----LDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANS 899
            ......|.|:.|...:.:   |.|    |.|:|        ||: .|.:.|...:...|.|:.:.
  Rat   899 LFNDLLVILKLCPKKKSSFTYTFCKAVGLLGMR--------FHL-FENEYYSHGITLATPLSGSE 954

  Fly   900 P----------INEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGT------ 948
            .          .:||: |.::.:|..|... |:...:...|          ||.:..||      
  Rat   955 KKQVLHFCALGSDEMQ-KFVEDLKESIAEV-TELEQIRIEW----------ELERQQGTKTLSAR 1007

  Fly   949 --GVR--PQFLSGAQTTLKDSL-NPSVKEHIGETS 978
              |.:  ||...|:.|..:::: .....|..||.|
  Rat  1008 SAGAQGDPQSKQGSPTAKREAMAGEKATESSGEVS 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 131/490 (27%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 72/188 (38%)
DUF1981 1080..1161 CDD:286414
Iqsec3NP_997500.1 bZIP <32..63 CDD:269834
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..149
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..272
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..471
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..610 1/13 (8%)
Sec7 653..841 CDD:279680 72/188 (38%)
PH_IQSEC 868..998 CDD:270128 32/170 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1002..1099 9/41 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1137..1175
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342758
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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