DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and garz

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_610761.2 Gene:garz / 36337 FlyBaseID:FBgn0264560 Length:1983 Species:Drosophila melanogaster


Alignment Length:1773 Identity:340/1773 - (19%)
Similarity:619/1773 - (34%) Gaps:569/1773 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 INAETYFLPFELACKSRSPRIVVT--ALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTI-YG 138
            |..:.:..||....::......:|  ||..:.||::||.:..:..:.|:    :::||...: :.
  Fly    61 IEPQVFLAPFLEVIRTADATGPLTSLALASVNKLLSYGLIDPTSPNLAD----IVERIADAVTHA 121

  Fly   139 CFSG--PQTDEAVQLQIIKALLTVVTS-QHVEIHEFTLLQAVRTCYDIYLSSK-NLVNQTTARAT 199
            .|.|  ..:|....:::|:.|.|::.| :...:...::.:.:.:|:.|....: :.:.:.:|..:
  Fly   122 RFMGTDQSSDGVTFMRVIEVLHTLIRSPEGAAVSNVSMCEVMLSCFKISFEPRLSELLRRSAEKS 186

  Fly   200 LTQMLNVIFARM-------------------------------------------ENQVYELPPP 221
            |..|:.:.|.|:                                           ::...|.||.
  Fly   187 LKDMVLLFFMRLPQFAEERSDTMLQKRFTIGDAASGATQEKLKRKTVAQAQTAPRKSSAVEEPPQ 251

  Fly   222 NSNPTNGSIHSE------------------DCNG-----------SGEESLRDSDEVIASELLAE 257
            .....|.::...                  |..|           :||      ||....|....
  Fly   252 TPQSANLTVPGHLKAPILATTPASPAGNILDMQGKITQTPTTTASTGE------DETTVPETPVI 310

  Fly   258 IISAAYNEAMKDQESVGEPEPTL---NGNDY---------SSHSDHDSVELHSENDAVVTAKFTH 310
            .:.:..:|.:.|.|: ||...||   |.::|         ...:|||...|.......:...|  
  Fly   311 QVESTESEPLLDGET-GEATSTLAEANSSEYINSVGVRFTQQSTDHDVTSLSPYGLPFIQELF-- 372

  Fly   311 ILQKDAFLVFRALCKLSMKPLPDGHPDPKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIK 375
                 .||:.  ||    .||...:.|...|      ..|.||.:..:.|.......|..:..:|
  Fly   373 -----RFLII--LC----NPLDKQNSDSMMH------TGLSLLTVAFEVAADNIGKYEGLLELVK 420

  Fly   376 QYLCVALSNNGVSLVP----EVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEAN-SSSF 435
            ..||    .|.:||:.    .:|...|.:...|..:.:.|||.|:|.:.:::...|...| .:.:
  Fly   421 DDLC----RNLISLLSSERLSIFAADLQLCFLLFESLRGHLKFQLEAYLRKLSEIIASDNPKTPY 481

  Fly   436 EHKWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKS 500
            |.:.:.:..|.::......|.::|:|||||....::||.|.|.|||....      ..|.:.  |
  Fly   482 EMRELALDNLLQLWRIPGFVTELYINYDCDLYCTDMFESLTNLLSKYTLS------ATNAVY--S 538

  Fly   501 MRIRGLECLVSIL-----KCMVEWSKDLYVN------------------PNMPVPPMQVQSPTST 542
            ..|..::.|:|::     .|..  ||:...|                  .|..:..:.:.|..|.
  Fly   539 THIISMDTLLSVIDSIERNCAA--SKNSSNNRESLPEAAPATGGSRHSRHNSGLEGIVIDSGNSV 601

  Fly   543 EQDQADTTIQTMHSGSSH--SLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQ 605
            ..::....|.:..:.|||  .|.|..|.:....|.|.:.|.:|.::..|.|.||::|:||:|:||
  Fly   602 AAEEKVENIASFINASSHRLRLQSGGEGVGITSEQLAKVKQKKRLLSQGTERFNQRPEKGIQYLQ 666

  Fly   606 EKQLLGATCG--DIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFL 668
            |..:|.|...  .:|.:|.|:..|||.:||.||.:..:...:::..::|:|||..:.|..|||..
  Fly   667 EHGILNAELDPMQVALFLRENPGLDKKMIGEYISKKKNVDSKILINFVDSFDFTGLRVDQALRLY 731

  Fly   669 LEGFRLPGEAQKIDRLMEKFASRYCECNPKNQ-LFQSADTVYVLAFSIIMLTTDLHSPQVKH--- 729
            ||.|||||||..|..::|.|:..:   :.:|| .|.:.|..:.||::||||..|.|:...|.   
  Fly   732 LETFRLPGEAPLIFLVLEHFSDHW---HKQNQDPFANVDAAFRLAYAIIMLNMDQHNSNAKRLNV 793

  Fly   730 KMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRK 794
            .||.|.:.|..||::..: |..:|.|:.:::.|...||.|           |..:...:.|    
  Fly   794 PMTLEDFTKNLRGLNGGE-DFDQEMLAQVFNAIKNEEIVM-----------PAEQTGLVRE---- 842

  Fly   795 LLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVR------PMFKMAWTPFLAAFS------ 847
               |.:.:|:             ::...|...|..:|.      .:|.:.|...|:|.|      
  Fly   843 ---NYQWKVL-------------LRRGDTHDGHFHYVHDASYDVEIFNIVWGASLSALSFMFDKS 891

  Fly   848 --VGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNID 910
              .|.|         ..|.|...:..|:..:::..:.||.|..|.:||.|.::...:|....|.:
  Fly   892 TETGYQ---------RTLAGFSKSAAISAHYNLHSDFDALVLTLCKFTTLLSSVEQHEPAPANNE 947

  Fly   911 T---------------IKTLIMVAHTDGNYLGSSW---LDIVKCISQLEL--------------- 942
            |               ::|:.::.|..|:.|..||   ||:...:.:|:|               
  Fly   948 TQQAVNFGLNGKAQAAMRTVFLLVHDYGDCLRESWKHILDLYLQLFRLKLLPKSLIEVEDFCEAN 1012

  Fly   943 --AQLIGTGVRPQFLSGAQTTLKDSLN------PSVKEH----IGETSSQSVVVAVDRIFTGSMR 995
              |.||....|.:..||..::|...::      |:.:|.    :|....:.  ..:|::...|..
  Fly  1013 GKAMLILEKPREKQESGLFSSLYSFISSEGQREPTYEEQDFIKLGRKCIKE--CQLDQMLQESKF 1075

  Fly   996 LDGDAIVDFVKALCQVSVDELQQ----------QQPRMFSLQKIVEISYYNMERIRLQW----SR 1046
            :..:::.:.:|  |.:::.:..|          :...:|.::.:|:|..:|.:|:...|    .:
  Fly  1076 VQLESLQELLK--CVLALLKAPQGHKSIGLPYAEDQTVFWMEFLVKIVVHNRDRMIPLWPAVRDQ 1138

  Fly  1047 IWQVLGEHFNAVGCN--------------------SNEEISFFALDSLRQLSMKFMEKGEFSNFR 1091
            ::.:|   ..:..|.                    .|||:....|.||:.|.|            
  Fly  1139 MYLLL---MGSASCGYDYLLNRCIVAVLKLAIYLMRNEELCPIVLQSLKMLLM------------ 1188

  Fly  1092 FQKDFLRPFEHIMKKNASPAIRDMVVRCIA----QMVNSQAHNIRS--GWKNIFSIFH-LAAG-- 1147
                            ..||:...:.:.|:    :::.:.|.||.|  .|:.||::.. :.||  
  Fly  1189 ----------------LKPALLLRISKQISIGIYELLKTSAQNIHSEQDWQIIFNLLECVGAGAV 1237

  Fly  1148 -----DNEEPI-VELAFQTTGKIIGD--------------------------------------- 1167
                 |.:.|: ...:.::.|.|.|:                                       
  Fly  1238 PPNYDDAQLPLPPNGSAKSDGAISGEEDATAVPERGYTSDSEITKASAAPAVSSPSAENWILVNN 1302

  Fly  1168 --------------------------------------LYK--RQFAIMVDS--------FQDAV 1184
                                                  |:|  ...|.:|.|        |:..|
  Fly  1303 KDSELTTASRPQSPPSLSAPPVNTLVYNCQLLDHAPFALFKCWDSLAFIVRSVAHITPYNFEACV 1367

  Fly  1185 KCLSEFATA-------------------------------------------------------- 1193
            :|:..|..|                                                        
  Fly  1368 RCIRIFVEACRDGGIRQRRKLESAAKQKSSKKRSERKPGMASSASSSNLTLLTGDPSDNQINGNA 1432

  Fly  1194 --------RFPDTSMEAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSL 1250
                    |:...|::.:.|:.|   ......|:|...|  |...:|.:...:|..||.|:|..:
  Fly  1433 AEQEDLAQRYEQLSIQLLDLMYT---LYTRTAQIFRWWA--EEGCTVPQSAALWSPGWCPLLQGI 1492

  Fly  1251 SCVVNRCKLDVRTRALTVLFE---IVKTYGESFKPHWWKDLFNVIFRIFDNMKLPEH-------- 1304
            :.:....:.:|||.|::.|.:   :|..........|......|:|.:.:.: |||.        
  Fly  1493 ARLAMDRRREVRTHAISCLQQRALLVHDLQTLSGTEWCSCFHQVLFPLLNEL-LPESNAAGQLDA 1556

  Fly  1305 -VTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHWCVQQSNEQLARSGTNCLEN- 1367
             :.|:|...|.|      .:..||.|:...|  :.|...|.:|...:....|:..:.|::.|.. 
  Fly  1557 ALLEESRIRTAT------IMSKVFLQHLTTL--IELGNAFNELWLDILDYIERFMKVGSDTLSEQ 1613

  Fly  1368 ---------LVISNGFKFNESTWDKTCQCILDIFNATLPQDL--LSWRPKAHSSNNIPQEHNHFE 1421
                     ||:.:...|:..             :.:|.|.|  |:||.......|:.:|..|.|
  Fly  1614 MQEILKNMLLVMHSVRVFHNQ-------------DGSLQQALWELTWRRIGEFLPNLKEELFHDE 1665

  Fly  1422 ALHIRCVVQLELIQTMDN 1439
            .         :..||:.|
  Fly  1666 G---------KRAQTLTN 1674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 340/1773 (19%)
garzNP_610761.2 PLN03076 <395..>986 CDD:215560 162/648 (25%)
Sec7 643..830 CDD:460178 67/190 (35%)

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