DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and cyth1b

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_005169523.1 Gene:cyth1b / 325586 ZFINID:ZDB-GENE-030131-4311 Length:416 Species:Danio rerio


Alignment Length:263 Identity:107/263 - (40%)
Similarity:152/263 - (57%) Gaps:32/263 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   530 PVPPMQVQSPTSTEQDQADTTIQTMHSGSSHSLNSNQEQLQDLPEALEE---------------- 578
            |.||......|..|:.:.:           :.....||.|:|:....:|                
Zfish    22 PAPPAVPDDLTPEEKQELE-----------NIRRRKQELLEDIQRLKDEITKVTNEIECLGSTQE 75

  Fly   579 --RKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDD 641
              ...|.:.|..|.:.||..|:||:|||.|.:||..||.|||::|::.|.|:||.||:|:||.|:
Zfish    76 RINMQRSKQMAMGRKKFNMDPKKGIQFLIENELLKNTCEDIAQFLYKGEGLNKTAIGDYLGERDE 140

  Fly   642 HSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSAD 706
            .:.:|:.|:::..:|..:.:|.|||..|..||||||||||||:||.||.|||:|||  .:|||.|
Zfish   141 FNIQVLHAFVELHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCQCNP--GVFQSTD 203

  Fly   707 TVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKN 771
            |.|||:|:||||.|.||:|.||.|.:.|::|.|||||:|. .||||:.|.::|:.|.....|:..
Zfish   204 TCYVLSFAIIMLNTSLHNPNVKDKPSAERFICMNRGINDG-GDLPEDLLRNLYESIKNEPFKIPE 267

  Fly   772 NSG 774
            :.|
Zfish   268 DDG 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 107/263 (41%)
cyth1bXP_005169523.1 Sec7 81..263 CDD:460178 95/184 (52%)
PH_GRP1-like 278..397 CDD:269954
Blue background indicates that the domain is not in the aligned region.

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