DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and sec71

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_594954.1 Gene:sec71 / 2543610 PomBaseID:SPAC4D7.01c Length:1811 Species:Schizosaccharomyces pombe


Alignment Length:1837 Identity:563/1837 - (30%)
Similarity:876/1837 - (47%) Gaps:350/1837 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NNSTKTKEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELISAGQIAEGNELPCAALP 67
            |:.....::|::.|.:.:...|..:|  |.:|:            |.|:..||    ||......
pombe   125 NSGKLNPQLFVIEAFKHMSKAKATKR--HKKLR------------EAINNVQI----ELQKQPFL 171

  Fly    68 LPKNDAASIINAETYFLPFELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSANPGHL-LIDR 131
            ||          |....|..:||::.|..::...|||..|||.|.:..   ..:.||..: |::|
pombe   172 LP----------EVILEPLVMACQTNSTTLLTITLDCFAKLIDYNYFD---SPTLNPSDITLMER 223

  Fly   132 IVVTIYGCFSGPQTDEAVQLQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQTTA 196
            :|.||..||.|..|.|.|||||:||||..:||:...|....||.|||..|:|:|..|:...|..|
pombe   224 VVNTIASCFCGESTPERVQLQIVKALLAAITSERTIIRHSFLLTAVRQTYNIFLLCKDSTTQAIA 288

  Fly   197 RATLTQMLNVIFARME---NQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIASELLAEI 258
            :..|.||::.:|.|:.   |...|....|.|.::.       ||:.:.    ::..|.|:|....
pombe   289 QVALLQMVDSVFQRLSTVLNHEREFSTINMNKSSS-------NGTPDR----ANSPIPSQLSENK 342

  Fly   259 ISAAYNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSENDAVVTAKFTHILQKDAFLVFRAL 323
            ::....|..|..:.|.|..|.          :.||:|..              |.:||||:.|||
pombe   343 LTLESFEHRKSFDQVREEAPL----------EEDSLEQQ--------------LLRDAFLLIRAL 383

  Fly   324 CKLSMKPLPDGHP-DPKSHELRSKVLSLHLL-------LLILQNAGPVFRSNEM----FIMAIKQ 376
            ||||:|.:|..|. |.||..:|||::||||:       :.||.:.....||...    .|.|:||
pombe   384 CKLSIKNIPYEHEYDLKSQSMRSKLMSLHLIYHILRTYMNILSDINVKIRSPTSTPTPLIDAVKQ 448

  Fly   377 YLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMV 441
            |:|:||:.|.||.|..|||:|..||..:||..|...|.::||||.|||..|||..:||.:.|.::
pombe   449 YICLALAKNVVSHVLPVFEISCEIFWLILSELKNFFKSELEVFFTEIFFPILEMRTSSNQQKIVL 513

  Fly   442 IQALTRICADAQSVVDIYVNYDC-DFSAANLFERLVNDLSKIAQGR------------------- 486
            :....|:|.:.|:::::|:|||| ..:..|::||.:..||:||...                   
pombe   514 LNIFHRMCEEPQTLIELYLNYDCISGNTENIYERAIVTLSRIASQSTSDPPPSFVFRDDQLVIDK 578

  Fly   487 --------------QALELGA------NPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPV 531
                          .:..:|:      .|..:..:|::...||:|.|..:..|....:. |.:.:
pombe   579 PGFVYHTLNDIPQLNSSTIGSYVHSHNPPYFDYQIRLKSYRCLISTLSSLFTWCNQTFA-PTVEI 642

  Fly   532 PPM--QVQSPTSTEQDQ---ADTTIQTMHSGSSHSLNSNQEQL-QDLPEALEERKMRKEVMETGI 590
            ...  :.:|.:..|:.|   ::.....::|.|..:|.|:.:.| .|.|...|..|.||:.::..|
pombe   643 TAKDDETESTSKGEEPQKSKSEPPSAGINSTSMDNLESSGQALATDDPSQFENLKHRKKQLQEAI 707

  Fly   591 ELFNRKPQKGVQFLQEKQLLGA-TCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAF 654
            :.||.||::|::.|.....:.: |..|||::|...|.|||.|:|.|:||.:|.:..:|.:::|..
pombe   708 QKFNYKPKEGIKILLSSHFIASKTPTDIAKFLISTEGLDKAVLGEYLGEGNDENIAIMHSFVDHM 772

  Fly   655 DFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLT 719
            .|..:..|.|||..|:.||||||||||||.|.|||.:|.:.|  ..:|::|||.|:||:|||||.
pombe   773 SFNDIPFVNALRSFLQKFRLPGEAQKIDRFMLKFAEKYIDDN--LGVFKNADTAYILAYSIIMLN 835

  Fly   720 TDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNN------------ 772
            |||||||||::||.:.:||.|||:.|. ::|.:.:|:.:|:||.::||.:|:.            
pombe   836 TDLHSPQVKNRMTCQDFIKNNRGVDDG-ANLSDSFLTEVYEEIQKNEIVLKDEQDPTSNFPEIPG 899

  Fly   773 ------SGMLQQAKPT--------------GKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSH 817
                  :..:..|..|              .|.|..||...|.|...:.|...|:..::      
pombe   900 TSNLSFAANISNALATVGRDLQREAYYMASNKMANKTEALFKDLIREQRERGKLSGNDI------ 958

  Fly   818 VKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLER 882
                :.:|:|.|||.|||:..|.|.|||||..||...||.:..|.|||.|.|:.:...|.|.|.|
pombe   959 ----YYTARHFEHVCPMFEAVWMPILAAFSEPLQLSSDPALIQLSLDGFRLAMNVIFFFSMDLPR 1019

  Fly   883 DAYVQALARFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIG 947
            :|::|.|.:||.||..|   |:|..|:..:|||:.::...|:.|..||.|::.||||||..|||.
pombe  1020 NAFMQTLTKFTHLNNTS---ELKWTNMHALKTLLEISLAHGDKLRDSWKDVLLCISQLERVQLIS 1081

  Fly   948 TGVRPQFLSGAQTT--LKDSLNPSVK----------------------------EHIGETSSQSV 982
            .||....|....||  |:.||:.:::                            |.:.|.||:.|
pombe  1082 AGVDINSLPDVSTTKPLRKSLDKNIRQSRSGSISLKHSKSFQSASTHSTKSSSVEIVREYSSREV 1146

  Fly   983 VVAVDRIFTGSMRLDGDAIVDFVKALCQVSVDE----LQQQQPRMFSLQKIVEISYYNMERIRLQ 1043
            |:|||.:|:.:..|..:.|.||||||.:||.:|    |:...||:|||||:||||||||.|||::
pombe  1147 VMAVDMLFSNTRNLGSEGIYDFVKALIEVSWEEIECSLELSNPRLFSLQKLVEISYYNMRRIRME 1211

  Fly  1044 WSRIWQVLGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPFEHIMKKNA 1108
            ||.||.:||.:|..|.|:.|..|:.||||||||.||:|:|..|.|:|:||||||:||.|.|:.:.
pombe  1212 WSSIWSLLGTYFTQVSCHENSIIASFALDSLRQFSMQFLEIEELSHFKFQKDFLQPFSHAMENSQ 1276

  Fly  1109 SPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNEEPIVELAFQTTGKIIGDLYKRQF 1173
            ...|:|:|:|||.||:.::..||||||:.||.|  ||.....|.:  |..|....::..|.....
pombe  1277 DLKIKDLVLRCIDQMIKARYQNIRSGWRTIFHI--LAYASKIENL--LVLQCAISVVSSLGHEHI 1337

  Fly  1174 AIMV--DSFQDAVKCLSEFA----TARFPDTSMEAIRLVRTCAQCVHEAPQLFAE------HAGM 1226
            :.::  .::.|.:.|:::||    ..:|             |..||.....|..|      |...
pombe  1338 SCVLTQGAYIDLISCITKFAKLNGNQKF-------------CLSCVDMLKNLEHELIKHLKHMKK 1389

  Fly  1227 ENDASVAEEDRVWVRGWFPMLFSLSCVVNRCK---LDVRTRALTVLFEIVKTYGESFKPHWWKDL 1288
            |:..|...|:..|:    |.|.|.:.::  |:   |:||::||.|||:.:..:.:.|...:|:.:
pombe  1390 ESVYSKKLEEEYWL----PFLLSFNEII--CEASDLEVRSKALKVLFDCLYRHADDFDEEFWETV 1448

  Fly  1289 FN----VIFRIF-----DNMKLPEHVTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFA 1344
            .|    .||.|.     ..:.|.::..|...||.||...||.|.|::....|:.| |.||.:...
pombe  1449 SNKALLSIFSILSITNSQRLYLAKNTEETEVWMLTTMVEALKAFIELIKNLFERL-HFLLPKALN 1512

  Fly  1345 QLHWCVQQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCILDIFNATLPQDLL-------- 1401
            .|..|:.|.|..:::.|.:|....|:.|..:|.:..||:....|..:...|||.:|.        
pombe  1513 LLEKCICQENSMISKVGLSCFSQFVLKNKNQFKDVDWDEIINSINQLLQMTLPIELRDPSLYPQV 1577

  Fly  1402 ------------SWRP----KAHSSNNIPQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSRKE 1450
                        |:||    :.:|.:....:.:|.:::.::|.:||                   
pombe  1578 NSDSSLEDVKENSFRPHEISRFNSQSVFKSKKHHLKSIVVKCTLQL------------------- 1623

  Fly  1451 DAETLAQAAADLTGGRSGSQSQLLECQRE---EQGMYGYLRTRQLLTLADCLMQSHRFAKRFNAD 1512
                                 .:|.|..|   ...|...:..|:::.|.|.|.||..||:.||:|
pombe  1624 ---------------------LMLNCLWELFHSDNMLTNIPKRKMVKLLDILKQSWEFAESFNSD 1667

  Fly  1513 HDQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKMYG-DENRRSDWPGIEQ--ELVQVCKEA 1574
            .:.|:.:..:|....: ||||.||.   .|....|:..:. ..:.:||....|:  :|:.|.::.
pombe  1668 FEIRAKILSSGIVEHM-PNLLSQEA---LCAKLYFYTAFECMSSLKSDSHDTEEYNDLMDVFQKK 1728

  Fly  1575 LGYYLSLQSEAHR-------------DAWTSLLLLILTRLLKMSDARFATHVSNYYSLLCEMM-C 1625
            :  ||:.|...|.             .|:..::..:::.:..:.:.:|:...|.:|.|||.:: |
pombe  1729 I--YLASQLVLHGFQRVIGDNPVKGVAAFQPVIAALVSYINSLDEIQFSRGKSEFYQLLCAIVAC 1791

  Fly  1626 FDLKPELRSVLRRVFMR 1642
            ..:..:|.:.|...|:|
pombe  1792 GHIDQQLGTSLSNAFLR 1808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 546/1749 (31%)
DCB 30..212 CDD:292830 62/182 (34%)
Sec7_N 312..465 CDD:289549 72/165 (44%)
Sec7 582..767 CDD:279680 84/185 (45%)
DUF1981 1080..1161 CDD:286414 37/80 (46%)
sec71NP_594954.1 DCB 110..304 CDD:292830 67/209 (32%)
Sec7_N 372..536 CDD:289549 70/163 (43%)
COG5307 380..1562 CDD:227623 416/1222 (34%)
Sec7 699..882 CDD:279680 84/185 (45%)
DUF1981 1248..1331 CDD:286414 37/86 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 230 1.000 Domainoid score I504
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 739 1.000 Inparanoid score I86
OMA 1 1.010 - - QHG54931
OrthoFinder 1 1.000 - - FOG0001583
OrthoInspector 1 1.000 - - otm47243
orthoMCL 1 0.900 - - OOG6_100729
Panther 1 1.100 - - LDO PTHR10663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1314
SonicParanoid 1 1.000 - - X714
TreeFam 1 0.960 - -
1312.860

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