DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and sec72

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_594555.1 Gene:sec72 / 2542107 PomBaseID:SPAC30.01C Length:1822 Species:Schizosaccharomyces pombe


Alignment Length:1834 Identity:537/1834 - (29%)
Similarity:885/1834 - (48%) Gaps:346/1834 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSTKTKEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELISAGQIAEGNELPCAALPL 68
            |..|:..:.:::.:|:::..|...::      :...:.:||:|..|.:..|.             
pombe   135 NLEKSTHVVLIKCIEQLIQIKVCMKN------EKMKNLMEQLKPLLQTECQF------------- 180

  Fly    69 PKNDAASIINAETYFLPFELACKSRSPRIVVTALDCLQKLIAYGHLTGSIQDSAN--PGHLLIDR 131
               |...|:..      |:...:|....::..:||.:.||.::.:.:...:..|:  |...|:..
pombe   181 ---DKFLIVEL------FQYCFESSQDEVMNISLDTISKLASFAYFSSKDKTPASFGPPKSLLQC 236

  Fly   132 IVVTIYGCFSGPQTDEAVQLQIIKALLTVV--TSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQT 194
            :|..:....:....|..:||.::|||...:  :.|...:|...||.:||..::::|...:...|:
pombe   237 MVDMVCDSINDEVVDGNLQLNVVKALSAFILCSEQDSMLHGAILLNSVRKLFNVFLLGDSDTIQS 301

  Fly   195 TARATLTQMLNVIFARM------ENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIASE 253
            .|:|:|||.:.|::.|:      .|....||..:::.|...:|.||                   
pombe   302 VAQASLTQAVTVVYERLRASHTQSNSTSALPEEDASVTENWVHDED------------------- 347

  Fly   254 LLAEIISAAYNEAMKDQESVGEPEP--TLNGNDYSSHSDHDSVELHSENDAVVTAKFTHILQKDA 316
                                 ||:.  ||:....:..|..|.|::.:::.||.:.:.:.|  :||
pombe   348 ---------------------EPDKKITLHSMASAGTSSLDHVKVDADDPAVTSVENSSI--QDA 389

  Fly   317 FLVFRALCKLSMKPL-PDGHPDPKSHELRSKVLSLHLLLLILQNAGPVFRSNEM----------- 369
            |||||::|:|:::.. ||...:.:|..:|:|::||||:..||:....:|....:           
pombe   390 FLVFRSMCRLAVRQTSPDKVSNIRSQAMRAKLISLHLIYRILEKNSDLFMDPTLQFRGIPALKGM 454

  Fly   370 -FIMAIKQYLCVALSNNGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEANSS 433
             .:.|.:||:|:.||.|.||.||:|||:...||..::.:.:.|.|::|||||:|::..:|:..::
pombe   455 TLVHASRQYICLVLSRNAVSPVPQVFEVCCDIFYLMVFSLRAHFKQEIEVFFREVYFPMLDLKNT 519

  Fly   434 SFEHKWMVIQALTRICADAQSVVDIYVNYDCD-FSAANLFERLVNDLSKIAQG------------ 485
            |:..|...:..:.|||.:.:::|::|:||||| .|..|:||:|:..:||:...            
pombe   520 SYNQKLHTLLIIQRICLNPRALVELYINYDCDRSSTTNVFEQLLFSISKVTTNGPSETISEDIEE 584

  Fly   486 -RQALE---------LGANPMQEKS------------MRIRGLECLVSILKCMVEWSKD-LYVNP 527
             ..:||         |..|....||            ::::.|:|::.||:.:..|::. ||:: 
pombe   585 ILPSLESSERSSTPFLNTNSASLKSEVVQLTTFSDFQLKLKTLQCVLDILQSLSNWAESGLYLS- 648

  Fly   528 NMPVPPMQVQSPTSTEQ----------DQADTTIQTMHSGSSHSLNSNQEQLQDL----PEALEE 578
                     :...||::          .::||.:...:.....|..:|......:    |...|.
pombe   649 ---------RRGVSTDEQGFVGDYDALSRSDTPVTNPYYNGKQSFEANSHSSSSIALADPSQFES 704

  Fly   579 RKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGD---IARWLHEDERLDKTVIGNYIGEND 640
            .|.||:::.|.|..||.||.:|::.|.|.:.:  ...|   ||.:|...:.:|||.:|:|:||.|
pombe   705 NKQRKKLLRTCINKFNYKPTRGLKMLSENEYV--DINDPKAIAEFLFRADGIDKTTLGDYLGEGD 767

  Fly   641 DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSA 705
            :.|..||..:||...|..::.|.|||.||:.||||||||||||:|.||:.||.:.||  ..|.:|
pombe   768 EKSISVMHEFIDCLSFINLKFVDALRRLLQCFRLPGEAQKIDRIMLKFSERYMKENP--SAFANA 830

  Fly   706 DTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMK 770
            ||.|:||:|||:|.||||||::|:|||||.:||.||||:|. :||.|:||..:||:|.::||.||
pombe   831 DTAYILAYSIILLNTDLHSPRIKNKMTKEDFIKNNRGINDG-ADLDEDYLGFVYDDILKNEIAMK 894

  Fly   771 NNSGMLQQA-------KPTGKQAFITEKR--RKLLWNMEMEVISLTATNLMQSV-------SHVK 819
            ::..:...|       ..:|...|.:..|  :::......|.::..||::::.:       |...
pombe   895 DDQELAAIAPLMNNFSTSSGFTTFTSNGRDLQRVACIQASEEMANKATSVLKKLLYQQKHGSQKT 959

  Fly   820 SPFTSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDA 884
            :.:.:|.|.||:.||.:..|.|.|||.|..||:.|......:||||.:..:||||:|.:.|.|||
pombe   960 NVYYNATHFEHIGPMLEATWMPILAALSNPLQNSDYVNELNMCLDGFQLVVRIACLFDLDLIRDA 1024

  Fly   885 YVQALARFTLLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTG 949
            :::.|..||.|::.|   |:|.:|...||||:.:|.|:||.|..||.||:..|||||..||||.|
pombe  1025 FIKTLTNFTNLHSTS---EIKLRNTMVIKTLLRIASTEGNNLKDSWKDILTIISQLERVQLIGVG 1086

  Fly   950 VRPQFLSGAQTTLKDSLNPSVK----------------------------------EHIGETSSQ 980
            |       .:|.:.|.:|..|:                                  |.:.|..|.
pombe  1087 V-------DETEVPDVINARVRRKNVNIGSSNSIRHVSGSTSRSTRTRSLSKPLSPEAVSELMST 1144

  Fly   981 SVVVAVDRIFTGSMRLDGDAIVDFVKALCQVSVDELQQ----QQPRMFSLQKIVEISYYNMERIR 1041
            .||:::|||||.:..|.|.|||.|.||||:||.||:..    :|||::||||:||||||||:|||
pombe  1145 EVVLSIDRIFTQTSSLSGSAIVSFFKALCEVSWDEITSSSDLEQPRLYSLQKLVEISYYNMQRIR 1209

  Fly  1042 LQWSRIWQVLGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPFEHIMKK 1106
            ::||.||.|||..||.||.:.|..::.|||||||||||.|:|..|.|.|.|||:||:|||::|..
pombe  1210 VEWSSIWNVLGRFFNMVGSDENRHVAVFALDSLRQLSMHFLEIEELSLFSFQKEFLKPFEYVMAS 1274

  Fly  1107 NASPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNEEPIVELAFQTTGKIIGDLYK- 1170
            :....::::|::|:.||:.::...|:||||.:|.:|..||....|.::.:.|.|...:..:.|. 
pombe  1275 DTVVEVKELVLQCVKQMIQAKISKIKSGWKTLFGVFTFAAKARSEILISMTFDTLVNLFSEHYDT 1339

  Fly  1171 -RQFAIMVDSFQDAVKCLSEFATARFPDTSMEAIRLV-RTCAQCVHEAPQLFAEHAGMENDASVA 1233
             .|...::|......:........:....|:|.||.| .:.:..:.|         |:.:..||.
pombe  1340 LMQQNCLIDMLISFTELCKNGTNQKISLQSLEIIREVYSSLSTMIKE---------GLSSKPSVN 1395

  Fly  1234 EEDRVWVRGWFPMLFSLSCVVNRCK-LDVRTRALTVLFEIVKTYGESFKPHWW-----KDLFNVI 1292
            |....:|   ||:||:...::...: |:||:|||..||.|.....:.|....|     |.:| .|
pombe  1396 ETFSKYV---FPVLFAYYDIIMSAEDLEVRSRALQNLFYIFLEESDDFTEETWEVVSRKFIF-PI 1456

  Fly  1293 FRIF----DNMKLPEHVTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHW----C 1349
            |.||    |...:.....|...|.:||...||.:::.:.|:.||.|.:||...|     |    |
pombe  1457 FSIFGPEADEATVMLRDEEIRTWQSTTLVEALRSLVTLLTRRFDKLHNLLKGYL-----WLFSNC 1516

  Fly  1350 VQQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCILDIFNATLPQDLLSWR---------- 1404
            :.:.|..|:|.||||::.|:..|.::|....|:......:::|..|.|..||...          
pombe  1517 ICRDNITLSRIGTNCMQQLLSGNAYRFEVKDWNLVADMFIELFKETTPHQLLLLETFSNGQGAPV 1581

  Fly  1405 --------------------PKAHSSNNI-PQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSR 1448
                                .::.|:::| |::...|.::..:|::||.||..:           
pombe  1582 YSENENTQLSHKRGGSLPETSRSISTSSISPEKQMEFRSMIRKCILQLLLISIV----------- 1635

  Fly  1449 KEDAETLAQAAADLTGGRSGSQSQLLECQREEQGMYGYLRTRQLLTLADCLMQSHRFAKRFNADH 1513
               ||.|                       :.:.::.::....:|.:...:..|.:||::||.|.
pombe  1636 ---AELL-----------------------DNEEVFNHIPHEHVLKITVAIYDSWQFARKFNEDK 1674

  Fly  1514 DQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKMYGDENRRSDWPG-------IEQELVQVC 1571
            ..|..|...||...: ||||:|||:|....:.:.|::.    :..|..|       |.:.|..||
pombe  1675 SLRITLLNVGFMKQL-PNLLRQETASALLYITLLFRLL----KTRDPLGKTETDQKIHKLLFPVC 1734

  Fly  1572 KEALGYYLSLQSEAH---RDAWTSLLLLILTRLLKMSDARFATHVSNYYSLLCEMMCFD-LKPEL 1632
            .|.|..|.||..|.|   ..||..::..||..:|.:....|:.::...|...|.|:..: |..:|
pombe  1735 AEMLDMYASLVVEKHTRNHAAWQPVIATILDSILNLPLELFSENIHTLYFSCCSMIAKENLDDQL 1799

  Fly  1633 RSVLRRVFMRIGPV 1646
            |.:|:..|.|:|.:
pombe  1800 RELLKNYFNRVGHI 1813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 515/1753 (29%)
sec72NP_594555.1 PLN03076 204..1815 CDD:215560 524/1737 (30%)

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