DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and Iqsec3

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001028526.1 Gene:Iqsec3 / 243621 MGIID:2677208 Length:1195 Species:Mus musculus


Alignment Length:508 Identity:135/508 - (26%)
Similarity:222/508 - (43%) Gaps:103/508 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   541 STEQDQADTTIQTMHSGSSHSLNSNQEQLQ----DLPE------------ALEERKMRKEVMETG 589
            |.:...:..:.::..|.|..|..:::|.||    .||.            .|....:||.:...|
Mouse   598 SEQLSSSSASTKSAKSSSEASAAASKEALQAVILSLPRYHCENPASCRSPTLSTDTLRKRLYRIG 662

  Fly   590 IELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGEN-DDHSKEVMCAYIDA 653
            :.|||..|.||:|||..:..:..|...:|.:|.:.:.|.:.:||.::|.: ...:::|:...:|.
Mouse   663 LNLFNINPDKGIQFLISRGFIPDTPIGVAHFLLQRKGLSRQMIGEFLGNSKKQFNRDVLDCVVDE 727

  Fly   654 FDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPK-NQLFQSADTVYVLAFSIIM 717
            .||..||:..|||......|:.|||||::||:|.|:.|||.|||: .|.|.:.||:::|||:||:
Mouse   728 MDFSNMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCMCNPEVVQQFHNPDTIFILAFAIIL 792

  Fly   718 LTTDLHSPQVK--HKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAK 780
            |.||::||.:|  .||..|.:|:..||:.|. :|:|.|.:..||:.|.:.|:| .|...:....|
Mouse   793 LNTDMYSPNIKPDRKMMLEDFIRNLRGVDDG-ADIPRELVVGIYERIQQKELK-SNEDHVTYVTK 855

  Fly   781 P----TGKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTP 841
            .    .|.:..::...|:|:....:  ..:|..|.:|            |...|.|.:|      
Mouse   856 VEKSIVGMKTVLSMPHRRLVCCSRL--FEVTDVNKLQ------------KQAAHQREVF------ 900

  Fly   842 FLAAFSVGLQDCDDPEIA---TLC----LDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANS 899
            ......|.|:.|...:.:   |.|    |.|:|        ||: .|.:.|...:...|.|:.:.
Mouse   901 LFNDLLVILKLCPKKKSSFTYTFCKAVGLLGMR--------FHL-FENEYYSHGITLATPLSGSE 956

  Fly   900 P----------INEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGT---GVR 951
            .          .:||: |.::.:|..|... |:...:...|          ||.:..||   .||
Mouse   957 KKQVLHFCALGSDEMQ-KFVEDLKESIAEV-TELEQIRIEW----------ELEKQQGTKTLSVR 1009

  Fly   952 -------PQFLSGAQTTLKDSL-NPSVKEHIGE--------TSSQSVVVAVDR 988
                   ||...|:.|..:::: .....|..||        ||..|..:.|:|
Mouse  1010 SAGAQGDPQSKQGSPTAKREAMAGEKAAESSGEVSIHNRLQTSQHSPKLGVER 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 135/508 (27%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549
Sec7 582..767 CDD:279680 72/188 (38%)
DUF1981 1080..1161 CDD:286414
Iqsec3NP_001028526.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..139
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..272
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..474
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..615 2/16 (13%)
Sec7 655..843 CDD:279680 72/188 (38%)
PH_IQSEC 870..1000 CDD:270128 32/170 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1004..1100 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1138..1175
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838954
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.