DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and Cyth3

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_035312.3 Gene:Cyth3 / 19159 MGIID:1335107 Length:399 Species:Mus musculus


Alignment Length:202 Identity:98/202 - (48%)
Similarity:139/202 - (68%) Gaps:5/202 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 ALEERK--MRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIG 637
            ::||.|  .|.:.:..|.:.||..|:||:|||.|..||.::..|:|::|::.|.|:|||||:|:|
Mouse    57 SVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLG 121

  Fly   638 ENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLF 702
            |.||.:.:|:.|:::..:|..:.:|.|||..|..||||||||||||:||.||||||.|||  .:|
Mouse   122 ERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNP--GVF 184

  Fly   703 QSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEI 767
            ||.||.|||:|:||||.|.||:..|:.|.|.|::|.|||||::. .|||||.|.::|:.|.....
Mouse   185 QSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITMNRGINEG-GDLPEELLRNLYESIKNEPF 248

  Fly   768 KMKNNSG 774
            |:..:.|
Mouse   249 KIPEDDG 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 98/202 (49%)
Cyth3NP_035312.3 Sec7 66..248 CDD:460178 93/184 (51%)
PH_GRP1-like 263..382 CDD:269954
C-terminal autoinhibitory region 391..399
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.