DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and bris-1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_500420.3 Gene:bris-1 / 177142 WormBaseID:WBGene00019726 Length:640 Species:Caenorhabditis elegans


Alignment Length:432 Identity:112/432 - (25%)
Similarity:179/432 - (41%) Gaps:101/432 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 KWMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKSMR 502
            :||||:       .....:..:::..|..|.:..     |:||  ...|.|..|.|....:::.|
 Worm    65 QWMVIR-------HKHDTIPDHLDARCGVSNSQR-----NELS--LTSRYATSLSAQLRIDRAAR 115

  Fly   503 IRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQ---------------------------SPT 540
                             |..|..:|..|.||:.|.                           :|.
 Worm   116 -----------------STTLDRSPPSPAPPVLVNLQNSNMIDSLMSPRLGNRRFGAAASRCAPA 163

  Fly   541 STEQDQADTTI--------QTMHSGS------------SHSLNSNQEQLQDLPEALEERKMRKEV 585
            :.|....:..:        ...||.|            |.|.|..::.....|..:.::: ||..
 Worm   164 AAELTSTEVWLPRPSLVNHNPAHSNSLPRLDKHRVHERSESSNGRKKSEVKPPRQMTDQE-RKRQ 227

  Fly   586 METGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAY 650
            ....:..||:||::|||.|.....:..:...:|..|.....|.|::||.|||........::..|
 Worm   228 YRIALNFFNKKPERGVQLLTAWGFVKNSPDSLASLLFGRRGLSKSMIGEYIGTLHSPYHSLVLKY 292

  Fly   651 IDA-FDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSA--DTVYVLA 712
            ..| .|.|.:||..|||..::.|.||.||:||||:::.||..|.:.|||.......  ||:::|:
 Worm   293 FTALIDIRGLEVDVALRKAMQFFILPKEAEKIDRIIQAFALHYSKSNPKRTSHYRGGWDTIHLLS 357

  Fly   713 FSIIMLTTDLHSPQVKHKMTKEQYIKMNRG---ISDSKS--DLPEEYLSSIYDEISEHEIK---- 768
            |:||||.||||||.||.:||:..::|..||   ||..|:  |:..:.|..|||.|.:.|:|    
 Worm   358 FAIIMLNTDLHSPNVKQRMTQADFVKNLRGQDKISGEKNGEDIDRKTLEGIYDRIKKDELKAGDD 422

  Fly   769 -----MKNNSGMLQQAKPTGKQAFITEKRRKLLWNMEMEVIS 805
                 .:.:..::.:.||.     :||..|:|:....::.:|
 Worm   423 HVAQVQRVDRAIVGKDKPR-----LTETPRRLVCYCRLQQVS 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 112/432 (26%)
DCB 30..212 CDD:292830
Sec7_N 312..465 CDD:289549 4/26 (15%)
Sec7 582..767 CDD:279680 73/192 (38%)
DUF1981 1080..1161 CDD:286414
bris-1NP_500420.3 Sec7 224..417 CDD:366596 73/192 (38%)
PH_IQSEC 445..573 CDD:270128 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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