DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and gbf-1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001366879.1 Gene:gbf-1 / 176609 WormBaseID:WBGene00007703 Length:1975 Species:Caenorhabditis elegans


Alignment Length:1776 Identity:364/1776 - (20%)
Similarity:631/1776 - (35%) Gaps:531/1776 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NDAASI--INAETYFLPFELACKSRSPR--IVVTALDCLQKLIAYGHLTGSIQDSANPGHLLIDR 131
            |:.|.:  :|.:||..||....|:::..  |...||..:.|.:.||.:..|...:||....:...
 Worm    53 NEVADLADMNPQTYLSPFLDVIKAQNTNGPITEAALAAVAKFLNYGLIDASSIKAANAVESIAYA 117

  Fly   132 IVVT--IYGCFSGPQTDEAVQLQIIKALLTVVTS-QHVEIHEFTLLQAVRTCYDI-YLSSKNLVN 192
            :|.|  |.|..:|  :||.|..:|::.|.:::.| ..:.:....:...:::|:.| :..:.:|:.
 Worm   118 VVHTKFIGGKSTG--SDECVLFKILQVLRSLLLSPPGILLSNEAVCDMMQSCFRIVFEQNLSLLL 180

  Fly   193 QTTARATLTQMLNVIFARMENQVYELPPPN----SNPTNG----------SIHSEDCNGSGEESL 243
            :..|.:||..|..:||.|:...|.:...|.    .|||..          |:|.|......|...
 Worm   181 RKAAESTLADMTQLIFTRLPTFVEDTRHPYIRQLVNPTEKRQKRKKKRQLSVHIETKAKEPENVP 245

  Fly   244 RDSDEVI--ASELLAEIISAA---YNEAMKDQ---ESVGEPEPTLN-----------GNDYSSHS 289
            .:..::|  |:| .||...||   |:..:...   ::|..|:|.:.           |::..|.|
 Worm   246 TEMTKLIGEAAE-TAETDGAANLGYDVVLTTDPPVDTVTHPDPPIEEIIKLAEPISAGDEADSES 309

  Fly   290 DHDSVELHSENDAV-VTAKFTHILQKDAFLVFRALCKLSMKPLPDGHP-------------DP-K 339
            :....|.|.|...| ..|.....:..|...:.........:.:|.|.|             :| .
 Worm   310 EGGGGEEHHERPPVRAHAGLQREIVSDEEEIDTEQTVGGEEKMPYGLPCCRELLRFLITMTNPVD 374

  Fly   340 SHELRSKV-LSLHLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSL-----VPEVFELSL 398
            .|...|.| |.|:||::.|:.......:.::.:..||..||    .|.:.|     :|.:...:.
 Worm   375 RHNTESMVILGLNLLIVALEAIADFLPNYDILMPLIKNELC----RNLLQLLDTNRLPVLAATNR 435

  Fly   399 SIFVALLSNFKVHLKRQIEVFFKEIFLNIL------EANSSSFEHKWMVIQALTRICADAQSVVD 457
            ..|: |..:.::|:|.|:|.:.|::...:|      |......|.|.|.:::|.::......|.:
 Worm   436 CCFL-LFESMRMHMKFQLESYLKKLQSIVLTEEKQHENGGGGTEQKEMALESLVQLWRIPGLVTE 499

  Fly   458 IYVNYDCDFSAANLFERLVNDLSK-----------------------------IAQGRQALELG- 492
            :|:|:|||....|:||    ||:|                             |.|..:..|.| 
 Worm   500 MYLNFDCDLYCGNIFE----DLTKLLVENSFPTVGGHTASLLSLDALLVVIETIEQNCEDRENGR 560

  Fly   493 ---ANPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTTIQTM 554
               |...:.|.::..||..|..     .:.:|.:.::......||.|                  
 Worm   561 GEVAKEQEHKDLKKLGLPVLSG-----YDLAKKMAISTGGKASPMPV------------------ 602

  Fly   555 HSGSSHSLNSNQE----QLQDLPEALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCG 615
              .||..|.||:.    :|..:.:.:|::| ||.::..|.||||:.|:||:.||:||.:||....
 Worm   603 --SSSIVLRSNRHAPSTELPSMSQIIEQKK-RKRLIAEGTELFNQSPKKGIAFLREKGILGHDEQ 664

  Fly   616 DIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQK 680
            .:.:||..:.:|||..|.:||. |..|: ||:.|::.:|.|....:..|||..||.||||||:.:
 Worm   665 SLVQWLRTNPQLDKKAIADYIC-NRKHA-EVLNAFVKSFPFENTRLDVALRMFLETFRLPGESAE 727

  Fly   681 IDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHSPQVKHK---MTKEQYIKMNRG 742
            |..:|:.|:..:...|  |:.|...|..:.|:::||||..|.|:||.|..   ||.:.:.:...|
 Worm   728 IALVMQHFSEEWFRAN--NEPFFHVDAAFTLSYAIIMLNVDQHNPQAKRSQPPMTVDCFRRNLSG 790

  Fly   743 ISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNMEMEVISLT 807
            .:||: |...|.|:.:|..|...||.|.      .:.|.|.|:.:        :|.:        
 Worm   791 TNDSR-DFDPEMLADMYQAIKTEEIVMP------AEQKGTVKEDY--------MWKV-------- 832

  Fly   808 ATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIATLCLDGIRCAIRI 872
               |::.....:..|..|....:...:|.:.|.|.:||.|......:..:|....|.|.|...:|
 Worm   833 ---LLRRGETAEGSFYHAPTGWNDHDLFAVCWGPAVAALSYVFDKSEHEQILQKALTGYRKCAKI 894

  Fly   873 ACIFHMSLERDAYVQALARFTLL-------------------------NANSP------INEMKA 906
            |..:.|....|.....|.:||.|                         :::||      ..|...
 Worm   895 AAYYGMKEVFDNLCIHLCKFTTLTSMRDGGAGGGADEDVDLSAAALLSHSSSPEAVALAFGENHK 959

  Fly   907 KNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLI------------------------- 946
            ..:.| :||..:.|.:||.|...|.::.:.:.||..|:|:                         
 Worm   960 AQLAT-RTLFYLVHENGNILREGWRNLFEALLQLFRARLLPAELTEVEDYVDEKGWVNIQRVHQK 1023

  Fly   947 -------GTGVRPQFLSGAQTTLKDSLNPSVKEHIGETSSQSVVVAVDR---IFTGSMRLDGDAI 1001
                   .:|:...|..|...:..|...|: :|.:......|.|::..|   |...|..|...::
 Worm  1024 ELPHTRNDSGLLSWFGLGGGASEADRRKPT-QEQLSSMKLASQVISECRPSQIVADSKYLTSTSL 1087

  Fly  1002 VDFVKALCQVSVDELQQQQPR--------------MFSLQKIVEISYYNMERIRLQWSRI----- 1047
            .:.:.::...|...::|.:|:              :|.|:.||.|:..|.:|:.|.|..:     
 Worm  1088 AELLSSIAANSAQIVEQAEPQQKTASLSGEDEDALVFYLELIVAITLENKDRLPLVWPHVRRHLE 1152

  Fly  1048 WQVLGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPFEHIMKKNASPAI 1112
            | :|...|..  |....|.:...|       ::...:..|.:.....|.|.....:::  .||..
 Worm  1153 W-LLSPRFGR--CPVLVERAVVGL-------LRVANRNLFRDNTVSDDVLHSLSMLLR--LSPKA 1205

  Fly  1113 RDMVVRCIA----QMVNSQAHNI--RSGWKNIFSIFHLA------------------------AG 1147
            ..:..|.||    :::.:.|.|:  :..|..:|::...|                        .|
 Worm  1206 LFIFSRQIAFGLYELIRANAANVHKKEHWAVLFALLEAAGAAVLPDDYVMMTTTEKQQQSLRVGG 1270

  Fly  1148 DNEE---------------------------------------PIVELAFQTTGKIIG------- 1166
            |.::                                       ..:|....:.|.::|       
 Worm  1271 DQQQQRMAYSDVEGASGRGGGAHEERAYTSEGEERRRGGYDSNSDLESRVDSAGSLLGAQKQPAD 1335

  Fly  1167 -------DLYK--------------------RQFAIMV--------------------------- 1177
                   |..|                    |||..:|                           
 Worm  1336 WIHLDHKDAAKATEEALTALGANVVSSKKNFRQFGSLVLRNGLGRHEPAAFLKVCECLAFLLRDA 1400

  Fly  1178 -----DSFQDAVKCLSEFATARF------------------------------------------ 1195
                 |:|:.:::||.....|..                                          
 Worm  1401 VHVTPDNFESSLQCLRTMVEASLDGGVYAAGPLSGDAQNRLRSNVTDEKAVKKHHHHHHGHKKKE 1465

  Fly  1196 --PDTSMEA------------------IRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDR--- 1237
              .|.:.:|                  :.|:..|:|...:.|.:||:.|   ..||.|..|.   
 Worm  1466 LCTDVTEDADESRNEEQQLIGNYQQMSLHLLDLCSQLHSQTPAIFAKWA---QGASPAASDLATV 1527

  Fly  1238 --VWVRGWFPMLFSLSCVVNRCKLDVRTRALTVLFEI-----VKTYGESFKPHWWKDLF-NVIFR 1294
              :|...|.|:|.::..:...|:..||..|||.|...     :.|.|.:    .|:..| .|:|.
 Worm  1528 AFIWTDIWRPLLQAIGRLSCDCRRGVRAAALTHLQRAFLPANMATLGAA----EWQSCFGEVLFP 1588

  Fly  1295 IFDNMKLP-----------EHVTEKSEWMTTTCNH--ALYAIIDVFTQYFDVLGHLLLE--ELFA 1344
            :...:..|           ..|........|..||  ||.|:     ..|..|..|||:  |.:.
 Worm  1589 LLTKLLEPFSQMDPIGMEDTRVRTLQIVAKTLLNHLSALSAL-----DSFPDLWMLLLDYMEQYL 1648

  Fly  1345 QLHWCVQQSNEQLARSGTNCLENLVI---SNGF-----KFNESTWDKTCQCILDIFNATLP---- 1397
            ::..| ...||.:..|    |:|:::   |.|.     :..:.|.::..:.:.::...|:|    
 Worm  1649 RVDSC-GNLNEAVPES----LKNMLLVMDSTGIFAATPRLYDVTVERLNKFMPELIKDTIPNPPR 1708

  Fly  1398 ----QDLLSWRPKAHSSNNIP 1414
                |...|...|.|:|...|
 Worm  1709 PGQQQSEASEPKKEHASGLEP 1729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 364/1776 (20%)
DCB 30..212 CDD:292830 38/148 (26%)
Sec7_N 312..465 CDD:289549 37/178 (21%)
Sec7 582..767 CDD:279680 69/187 (37%)
DUF1981 1080..1161 CDD:286414 16/149 (11%)
gbf-1NP_001366879.1 COG5307 354..>998 CDD:227623 175/709 (25%)
Sec7 631..814 CDD:396096 69/187 (37%)
PLN03209 <1696..1810 CDD:178748 8/34 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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