DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and Cyth3

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_038944952.1 Gene:Cyth3 / 116693 RGDID:620399 Length:471 Species:Rattus norvegicus


Alignment Length:202 Identity:98/202 - (48%)
Similarity:139/202 - (68%) Gaps:5/202 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   575 ALEERK--MRKEVMETGIELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIG 637
            ::||.|  .|.:.:..|.:.||..|:||:|||.|..||.::..|:|::|::.|.|:|||||:|:|
  Rat   129 SVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQFLYKGEGLNKTVIGDYLG 193

  Fly   638 ENDDHSKEVMCAYIDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLF 702
            |.||.:.:|:.|:::..:|..:.:|.|||..|..||||||||||||:||.||||||.|||  .:|
  Rat   194 ERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDRMMEAFASRYCLCNP--GVF 256

  Fly   703 QSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEI 767
            ||.||.|||:|:||||.|.||:..|:.|.|.|::|.|||||::. .|||||.|.::|:.|.....
  Rat   257 QSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITMNRGINEG-GDLPEELLRNLYESIKNEPF 320

  Fly   768 KMKNNSG 774
            |:..:.|
  Rat   321 KIPEDDG 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 98/202 (49%)
Cyth3XP_038944952.1 Sec7 138..320 CDD:460178 93/184 (51%)
PH_GRP1-like 335..454 CDD:269954
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.