DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Cyth2

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_446363.1 Gene:Cyth2 / 116692 RGDID:620398 Length:400 Species:Rattus norvegicus


Alignment Length:249 Identity:101/249 - (40%)
Similarity:150/249 - (60%) Gaps:16/249 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 QSPTSTEQDQADTTIQTMHSGSSHSLNSNQEQLQDLPEALEERK-----------MRKEVMETGI 590
            :.|..|.:::.:  ::.:.......|...|...::|.||:.|.:           .|...|..|.
  Rat     7 EPPDLTPEERME--LENIRRRKQELLVEIQRLREELSEAMSEVEGLEANEGSKTLQRNRKMAMGR 69

  Fly   591 ELFNRKPQKGVQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFD 655
            :.||..|:||:|||.|.:||..|..:|||:|::.|.|:||.||:|:||.::.:..|:.|::|..:
  Rat    70 KKFNMDPKKGIQFLVEHELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNLSVLHAFVDLHE 134

  Fly   656 FRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTT 720
            |..:.:|.|||..|..||||||||||||:||.||.|||.|||  .:|||.||.|||:|::|||.|
  Rat   135 FTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNP--GVFQSTDTCYVLSFAVIMLNT 197

  Fly   721 DLHSPQVKHKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSG 774
            .||:|.|:.|...|:::.|||||::. .||||:.|.::||.|.....|:..:.|
  Rat   198 SLHNPNVRDKPGLERFVAMNRGINEG-GDLPEDLLRNLYDSIRNEPFKIPEDDG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 101/249 (41%)
Cyth2NP_446363.1 Sec7 61..243 CDD:460178 91/184 (49%)
PH_GRP1-like 258..378 CDD:269954
C-terminal autoinhibitory region. /evidence=ECO:0000250 387..395
Blue background indicates that the domain is not in the aligned region.

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