DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec71 and Gbf1

DIOPT Version :9

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_006526643.1 Gene:Gbf1 / 107338 MGIID:1861607 Length:1862 Species:Mus musculus


Alignment Length:1871 Identity:399/1871 - (21%)
Similarity:676/1871 - (36%) Gaps:593/1871 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KEMFIVRALEKILA---DKDIRRSHHSQLKKSCDSAL---EQIKAELISAGQIAEGNELPCAALP 67
            |.::|::....|:.   .::.|.|.|..|.:..|..|   ..:|..|.|..:::|          
Mouse     4 KNIYIIQGEINIVVGAIKRNARWSTHIPLDEERDPLLHSFSNLKEVLNSVTELSE---------- 58

  Fly    68 LPKNDAASIINAETYFLPFELACKSRSPRIVVT--ALDCLQKLIAYGHLTGSIQDSANPGHLLID 130
                     |....:..||....:|......:|  ||..:.|.::|..:..:.:.:|.....:.|
Mouse    59 ---------IEPNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYALIDPTHEGTAEGMENMAD 114

  Fly   131 RIVVTIYGCFSG--PQTDEAVQLQIIKALLTV--------VTSQHV-EIHEFTLLQAVRTCYDIY 184
            .:.   :..|.|  |.:||.|.::|::.|.|:        :|::.| ||    :....|.|:::.
Mouse   115 AVT---HARFVGTDPASDEVVLMKILQVLRTLLLTPVGTHLTNESVCEI----MQSCFRICFEMR 172

  Fly   185 LSSKNLVNQTTARATLTQMLNVIFARM-----ENQVY---------------------------- 216
            ||.   :.:.:|..||..|:.::|.|:     |.:.|                            
Mouse   173 LSE---LLRKSAEHTLVDMVQLLFTRLPQFKEEPKSYVGTNMKKLKMRAGGMSDSSKWKKQKRSP 234

  Fly   217 -------------ELPPPN-----SNPTNG--------SIHS----------EDCNGSG------ 239
                         |||.||     ||.|.|        ||.|          ..|..||      
Mouse   235 RPPRHTTKVTPGSELPTPNGATLPSNLTGGVPFIDAPTSISSASSEAASTVVSPCTDSGLELSSQ 299

  Fly   240 ---EESLRD----------------SDEVIASELLAEIISAAYNEAMKDQESVGEPEPTLNGNDY 285
               :|.|.|                |.|:.||:.|......|:.|..:.......||..   .:.
Mouse   300 TTSKEDLTDLEQAGSPREITTSEPGSSEMGASDQLDPQQEGAHVEKAQSASVESIPEVL---EEC 361

  Fly   286 SSHSDH-DSVELHSENDAVVT--AKFTHILQKDAFL-----------VFRALCKLSMKPLPDGHP 336
            :|.:|| ||..:| :.|.|..  .:||...||:...           :||.|..|:       :|
Mouse   362 TSPADHSDSASVH-DMDYVNPRGVRFTQSSQKEGTALVPYGLPCIRELFRFLISLT-------NP 418

  Fly   337 DPKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIKQYLC----VALSNNGVSLVPEVFELS 397
            ..:.:......:.||||.:.|::| ||.:. :..:..||..:|    ..||...::|    :..|
Mouse   419 HDRHNSEVMIHMGLHLLTVALESA-PVAQC-QTLLGLIKDEMCRHLFQLLSVERLNL----YAAS 477

  Fly   398 LSIFVALLSNFKVHLKRQIEVFFKEIF-LNILEANSSSFEHKWMVIQALTRICADAQSVVDIYVN 461
            |.:...|..:.:.|||.|:|::.|::. :..:|.....:|.|.|.::|:.::......|.::|:|
Mouse   478 LRVCFLLFESMREHLKFQLEMYIKKLMEIITVENPKMPYEMKEMALEAVVQLWRIPSFVTELYIN 542

  Fly   462 YDCDFSAANLFERLVNDLSKIAQGRQALELGANPM--QEKSMRIRGLE------------CLVSI 512
            ||||:..:||||.|...|||          .|.|:  |..:..:..|:            |...:
Mouse   543 YDCDYYCSNLFEDLTKLLSK----------NAFPVSGQLYTTHLLSLDALLTVIDSTESHCQAKV 597

  Fly   513 LKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTT----------IQTMH--SGSSHSLNSN 565
            |..:.:..|.....|....    |.....|.:.:..|:          .:.:|  ||...|....
Mouse   598 LNTLNQQEKKETARPGFEA----VDGNPETNKSERATSDGKSTGVALDARGLHFPSGGWLSTEHG 658

  Fly   566 QEQLQDLPEA-------------------------LEERKMRKEVMETGIELFNRKPQKGVQFLQ 605
            :...:||.||                         |.|.|.:|:::.||.|.||:||:||:||||
Mouse   659 KPGCRDLEEAGDSGADKKFTRKPPRFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQ 723

  Fly   606 EKQLLGATCG--DIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAYIDAFDFRQMEVVAALRFL 668
            ||.||.....  ::|:||.|:.||||.:||.::  :|..:.:::.:::..|.|:.:.:..|||..
Mouse   724 EKGLLTIPMDNTEVAQWLRENPRLDKKMIGEFV--SDRKNMDLLESFVSTFSFQGLRLDEALRLY 786

  Fly   669 LEGFRLPGEAQKIDRLMEKFASRYCECNPKNQLFQSADTVYVLAFSIIMLTTDLHSPQVKHK--- 730
            ||.|||||||..|.||:|.|...:..||  ...|.::|..:.||:::|||.||.|:..|:.:   
Mouse   787 LEAFRLPGEAPVIHRLLEVFTEHWRSCN--GSPFANSDACFALAYAVIMLNTDQHNHNVRKQNAP 849

  Fly   731 MTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKM-KNNSGMLQQAKPTGKQAFITEKRRK 794
            ||.|::.|..:|::..| |..::.|..:|..|...||.| :..:|::               |..
Mouse   850 MTLEEFRKNLKGVNGGK-DFEQDILEDMYHAIKNEEIVMPEEQTGLV---------------REN 898

  Fly   795 LLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGLQDCDDPEIA 859
            .:|::           |:...:..:..|.......:...:|.|.|.|.:||.|.......:..|.
Mouse   899 YVWSV-----------LLHRGASPEGVFLRVPPGSYDLDLFTMTWGPTIAALSYVFDKSLEETII 952

  Fly   860 TLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSPINEMKAKNIDTI-----------K 913
            ...:.|.|....|:..:.:|...|..:.:|.:||.|::.|      .:|:.::           |
Mouse   953 QKAISGFRKCAMISAHYGLSDVFDNLIISLCKFTALSSES------IENLPSVFGSNPKAHIAAK 1011

  Fly   914 TLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGVRPQFLSGAQTTLKDSLNPSVK------- 971
            |:..:||..|:.|...|.:|::.:.||         .|.|.|..|...::|.::|:.|       
Mouse  1012 TVFHLAHRHGDILREGWKNIMEAMLQL---------FRAQLLPKAMVEVEDFVDPNGKISLQREE 1067

  Fly   972 --EHIGETSSQSVV-------------------------VAVD--------RIFTGSMRLDGDAI 1001
              .:.||::..|.|                         ||:|        ::.|.|..|..:::
Mouse  1068 TPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALDCIKQCDPEKMITESKFLQLESL 1132

  Fly  1002 VDFVKALCQVSVD-ELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQVLGEHFNAVGCNSNEE 1065
            .:.:|||..|:.| |...::...|.|:.::.|...|.:|:    ..:||.:.:|...: |...::
Mouse  1133 QELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENRDRV----GCVWQTVRDHLYHL-CVQAQD 1192

  Fly  1066 ISFF---ALDSLRQLSMKFMEKGEFS-----NFRFQKDFLRPFEHIMKKNASPAIRDMVVRCIAQ 1122
            ..|.   |:..|.:|:::.:.:.|.|     :.|...        :||.:....:...|...:.:
Mouse  1193 FCFLVERAVVGLLRLAIRLLRREEISGQVLLSLRILL--------LMKPSVLSRVSHQVAYGLHE 1249

  Fly  1123 MVNSQAHNIRSG--WKNIFSIFHL-----------------------AAGDNEEP---------- 1152
            ::.:.|.||.||  |..:|::...                       |..|:|.|          
Mouse  1250 LLKTNAANIHSGDDWATLFTLLECIGSGVKPPDALQATARADAPDAGAQSDSELPSYHQNDVSLD 1314

  Fly  1153 ---------------------------IVELAFQTTGKIIGDLYK--------------RQFAIM 1176
                                       :|...:...||...|..|              .|:::.
Mouse  1315 RGYTSDSEVYTDHGRPGKIHRSATDADMVNSGWLVVGKDDIDNSKPGAGLSRPGPSPLVNQYSLT 1379

  Fly  1177 V-------------------------------DSFQDAVKCLSEFATA----------------- 1193
            |                               |:|:..||.|..|..|                 
Mouse  1380 VGLDLGPHDTKSLLKCVESLSFIVRDAAHITPDNFELCVKTLRIFVEASLNGGCKSQDKRSKSHK 1444

  Fly  1194 ------RFPDTSMEAIRLVRTCAQCVHEAPQLFAEHAGMENDASV-------------------- 1232
                  ||.....|...|.|......|...   ..|:..|.|..|                    
Mouse  1445 YDSKGNRFKKKPKEGSMLRRPRGSNQHATR---GGHSDEEEDEGVPASYHTVSLQVSQDLLDLMH 1506

  Fly  1233 -------------AEEDR---------------VWVRGWFPMLFSLSCVVNRCKLDVRTRALTVL 1269
                         |||.|               :|...|.|:|..::|:....:..||.:|||.|
Mouse  1507 TLHTRAASIYSSWAEEQRHLEGGGQKIEADSRTLWAHCWCPLLQGIACLCCDARRQVRMQALTYL 1571

  Fly  1270 FEIVKTYG-ESFKPHWWKDLFN-VIFRIFDNMKLPEHVTEKS-EWMTTTCNHALYAIIDVFTQYF 1331
            ...:..:. :......|:..|| |:|.:.  .||.|:::... ..|..|...|...:..||.|: 
Mouse  1572 QRALLVHDLQKLDALEWESCFNKVLFPLL--TKLLENISPADVGGMEETRMRASTLLSKVFLQH- 1633

  Fly  1332 DVLGHLLLEELFAQLHWCV----------QQSNEQLARSGTNCLEN--LVISNGFKFN------- 1377
              |..||....||.| |..          ..|::.|:.:....|:|  ||:.....|:       
Mouse  1634 --LSPLLSLSTFAAL-WLTILDFMDKYMHAGSSDLLSEAIPESLKNMLLVMDTAEIFHSADARGG 1695

  Fly  1378 ------ESTWDKTCQCIL-----DIFNATLPQDLLSWRPKAHSSNNIPQEH 1417
                  |.||:: ..|.|     ::|..|:.||.:...|  ||...:...|
Mouse  1696 GPSALWEITWER-IDCFLPHLRDELFKQTVIQDPMPAEP--HSQKPLASTH 1743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 398/1867 (21%)
DCB 30..212 CDD:292830 42/202 (21%)
Sec7_N 312..465 CDD:289549 40/168 (24%)
Sec7 582..767 CDD:279680 71/189 (38%)
DUF1981 1080..1161 CDD:286414 18/147 (12%)
Gbf1XP_006526643.1 Sec7_N 401..546 CDD:372313 38/157 (24%)
COG5307 484..>1003 CDD:227623 147/569 (26%)
Sec7 700..885 CDD:366596 71/189 (38%)
PHA03247 <1730..1860 CDD:223021 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838951
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D815698at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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