DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and iqsec1a

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:NP_001373523.1 Gene:iqsec1a / 100334106 ZFINID:ZDB-GENE-120813-2 Length:1000 Species:Danio rerio


Alignment Length:1122 Identity:235/1122 - (20%)
Similarity:409/1122 - (36%) Gaps:314/1122 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSTKT----KEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELISAGQIAEGNE---- 60
            |.||.    ||:..:...::.|.::..||...          |||..::|     .||.:.    
Zfish     7 NPTKAAGYLKELNKIIETQQTLLERQKRRIFE----------LEQHVSDL-----CAENSRLRLE 56

  Fly    61 -----LPCAALPLPKND-------AASIINAETYFLPFELACKSRSPRIVV--TALDCLQKLIAY 111
                 |.|....:.:|.       ..|.|......||.|:.....|.|..|  ..:.|.|...|.
Zfish    57 YQRHLLTCRLRSIRENSPEQQSEYGGSRIVRRHASLPVEMTDSPNSLRSAVCRRTVPCRQWKSAS 121

  Fly   112 GHLTGSIQDSANPG------------------HLLIDRIVVTIY--GCFSGPQTDEAVQLQIIKA 156
            ..:.|:: :|:.||                  .|..|:...::|  ...||||..:..:||..::
Zfish   122 LGVEGTV-ESSEPGPSVDTSIGYGRGPVTHSSSLSPDQSEGSLYSHSIQSGPQRPQRPKLQHSQS 185

  Fly   157 LL----------------------TVVTSQHVEIHE------FTLLQAVR---TCYDIYLSSKNL 190
            :|                      |.:..:.||:.|      |....|.|   |.:..|..:||.
Zfish   186 ILRKQAEEEAIKRSRSLSESYELSTDLQDKKVEMLERKYGGRFITRHAARTIQTAFRHYQMNKNF 250

  Fly   191 VNQTTARATLTQMLNVIFARMENQV-YELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVIA--- 251
            ....::.:.......::.:.|..|. :|.|.        .:||....|.....:.:|..:.|   
Zfish   251 ERLRSSMSENRMSRRILLSNMRMQFSFEAPE--------KVHSSFFEGRQMSLMEESSHIGAMVQ 307

  Fly   252 -SELLAEIISAAYNEAMKD-QESVGEPEPTLNGNDYSSHSDHDSVELHSENDAVVTAKFTHILQK 314
             .|.:..|:.|.  |...| .:::.|.|.|.            |.::.|..:::..|.....|.|
Zfish   308 PGEKVPVILEAP--ETQNDLTDTITELEDTF------------SKQVKSLAESIDDALNCRSLHK 358

  Fly   315 DAFLVFRALCKLSMK---PLPDGHPDPKSHELRSKVLSLHLLLLILQNAGPVFRSNEMFIMAIKQ 376
            :.....:.:|:|..|   |.||.|     |.| .::..: .|.:..:...|:.:.:.        
Zfish   359 EEIQPEQTVCELQQKRELPQPDEH-----HRL-DEICDV-TLFIDEEELSPLVQPSS-------- 408

  Fly   377 YLCVALSN---NGVSLVPEVFELSLSIFVALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHK 438
                |.|:   ..||...|.:.:..::..:..|                         :.|.:::
Zfish   409 ----AESDQHTQSVSASQEYWSMDANMDTSARS-------------------------TPSLDYQ 444

  Fly   439 WMVIQALTRICADAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKSMRI 503
                  ..::|.|. .|:.|....|....|::..|:.:.....:.:...|.. .|||......|:
Zfish   445 ------SPKLCVDL-PVLTIEPPSDSSADASDRSEQGLVQTQNVPKQTTAAP-RANPKHGLPARV 501

  Fly   504 RGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTTIQTMHSGSSHSLNSNQEQ 568
            ..|.                  ....|:...||.|..:|...:...:......|.:.|:|||...
Zfish   502 PSLS------------------GEEEPLRHRQVVSHLATNGSRQSKSESDFSDGDNDSINSNSNS 548

  Fly   569 L-----------QDLPE--------------ALEERKMRKEVMETGIELFNRKPQKGVQFLQEKQ 608
            :           |:|.:              |.....|||.....|:.|||:||:||:|:|.|:.
Zfish   549 IDTINSESSSSQQNLSKQTYHKDTRNSWDSPASSSDIMRKRQYRIGLNLFNKKPEKGIQYLTERG 613

  Fly   609 LLGATCGDIARWLHEDERLDKTVIGNYIGEND-DHSKEVMCAYIDAFDFRQMEVVAALRFLLEGF 672
            .:..|...:|.:|.:.:.|.:.:||.::|... ..:::|:...:|..||..||:..|||......
Zfish   614 FIPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDELDFSGMELDEALRKFQAQI 678

  Fly   673 RLPGEAQKIDRLMEKFASRYCECN-PKNQLFQSADTVYVLAFSIIMLTTDLHSPQVK--HKMTKE 734
            |:.|||||::||:|.|:.|||.|| ...:.|::.||:::|||:||:|.||::||.||  .||..|
Zfish   679 RVQGEAQKVERLIEAFSQRYCICNHDVVRQFRNPDTIFILAFAIILLNTDMYSPNVKIERKMKLE 743

  Fly   735 QYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKM-----------------KNNSGMLQQAKPT 782
            .::|..||:.|.: |:|.|.|..||:.|.:.|:|.                 |...|.|..    
Zfish   744 DFVKNLRGVDDGE-DIPREMLVGIYERIQKKELKTNEDHVSQVQKVEKLIVGKKQMGSLHH---- 803

  Fly   783 GKQAFITEKRRKLLWNMEMEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMF------------ 835
            |....:::..|:|:  ....:..:...|.:|.:.            :|.|.:|            
Zfish   804 GLGCVLSQAHRRLV--CYCRLFEVPDPNRLQKLG------------QHQREIFLFNDLLVVTKIF 854

  Fly   836 ---KMAWT-PFLAAFSV-GLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFT-- 893
               |.:.| .|..:||: |:|                         .|..|...|...: |.|  
Zfish   855 QKKKNSVTYSFRQSFSLYGMQ-------------------------VMLFENQFYPNGI-RLTSA 893

  Fly   894 --------LLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGV 950
                    |:|.|:|..:.:.:.|..::..|........|...|.|:..|.:.:..::|.: :|:
Zfish   894 IPGADFKVLINFNAPNIQDRKRFISDLRESIAEVQEMEKYRIESELEKQKGVVRPSMSQSM-SGL 957

  Fly   951 RPQFLSGA--QTTLKDS 965
            :.:..:|:  :|:|.||
Zfish   958 KKETGNGSMGRTSLDDS 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 230/1109 (21%)
iqsec1aNP_001373523.1 Sec7 587..775 CDD:460178 73/188 (39%)
IQ_SEC7_PH 807..936 CDD:465120 26/168 (15%)

Return to query results.
Submit another query.