DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec71 and iqsec1b

DIOPT Version :10

Sequence 1:NP_609675.2 Gene:Sec71 / 34785 FlyBaseID:FBgn0028538 Length:1653 Species:Drosophila melanogaster
Sequence 2:XP_005169390.3 Gene:iqsec1b / 100148736 ZFINID:ZDB-GENE-120813-1 Length:1252 Species:Danio rerio


Alignment Length:507 Identity:136/507 - (26%)
Similarity:231/507 - (45%) Gaps:91/507 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   538 SPTSTEQDQADTTI--QTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKG 600
            |.:|:.....:.|:  ||.|..:.:|.:|         .|.....:||.....|:.|||:||:||
Zfish   606 SESSSRDSLREQTLSKQTYHKETRNSWDS---------PAFSNDIIRKRHYRIGLNLFNKKPEKG 661

  Fly   601 VQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGEND-DHSKEVMCAYIDAFDFRQMEVVAA 664
            :|:|.|:..:..|...:|.:|.:.:.|.:.:||.::|... ..:::|:...:|..||..||:..|
Zfish   662 IQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSAMELDEA 726

  Fly   665 LRFLLEGFRLPGEAQKIDRLMEKFASRYCECNP-KNQLFQSADTVYVLAFSIIMLTTDLHSPQVK 728
            ||......|:.|||||::||:|.|:.|||.||| ..:.|::.||:::|||:||:|.||::||.||
Zfish   727 LRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVK 791

  Fly   729 --HKMTKEQYIKMNRGISDSKSDLPEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEK 791
              .||..|.::|..||:.|.: |:|.|.|..||:.|.:.|  :|.|...:.|.:...| ..:.:|
Zfish   792 PERKMKLEDFVKNLRGVDDGE-DIPREMLVGIYERIRKRE--LKTNEDHVSQVQKVEK-LIVGKK 852

  Fly   792 RRKLLWNMEMEVISLTATNLM--QSVSHVKSPFTSAKHLEHVRPMF---------------KMAW 839
            ....|.:....|:||....|:  ..:..|..|....|...|.|.:|               |.:.
Zfish   853 PIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSV 917

  Fly   840 T-PFLAAFSV-GLQDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFT--------- 893
            | .|..:||: |:|                          :.|..:.|.....|.|         
Zfish   918 TYSFRQSFSLYGMQ--------------------------VLLFENQYYPNGVRLTSALPGADIK 956

  Fly   894 -LLNANSPINEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGVRPQFLSG 957
             |:|.|:|..:.:.|..|.::..|........|...|.|:..|.:.:..::|  .:|::.:..:|
Zfish   957 VLINFNAPNPQDRKKFTDDLRESIAEVQEMEKYRIESELEKQKGVVRPSISQ--SSGLKKETGNG 1019

  Fly   958 --AQTTLKDS-----------LNPSVKE--HIGETSSQSVVVAVDRIFTGSM 994
              ::|:|.||           |:.|:::  ..|:...:|...::|....||:
Zfish  1020 NLSRTSLDDSYAMGEGLKRSALSSSLRDLSDAGKRGRRSSAGSLDSNMEGSI 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec71NP_609675.2 PLN03076 13..1580 CDD:215560 136/507 (27%)
iqsec1bXP_005169390.3 None

Return to query results.
Submit another query.